LOCUS BC036820 4609 bp mRNA linear HUM 06-JAN-2006 DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2O, mRNA (cDNA clone IMAGE:4181549), partial cds. ACCESSION BC036820 VERSION BC036820.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4609) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4609) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 78 Row: a Column: 1. FEATURES Location/Qualifiers source 1..4609 /db_xref="H-InvDB:HIT000094630" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4181549" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..4609 /gene="UBE2O" /gene_synonym="E2-230K" /gene_synonym="FLJ12878" /gene_synonym="KIAA1734" /db_xref="GeneID:63893" /db_xref="HGNC:HGNC:29554" /db_xref="IMGT/GENE-DB:29554" /db_xref="MIM:29554" CDS <1..3080 /gene="UBE2O" /gene_synonym="E2-230K" /gene_synonym="FLJ12878" /gene_synonym="KIAA1734" /codon_start=3 /product="UBE2O protein" /protein_id="AAH36820.1" /db_xref="GeneID:63893" /db_xref="HGNC:HGNC:29554" /db_xref="IMGT/GENE-DB:29554" /db_xref="MIM:29554" /translation="TRPKIFSSVQWLSGVKPVLSTKSKFRVVVEEVQVVELKVTWITK SFCPGGTDSVSPPPSVITQENLGRVKRLGCFDHAQRQLGERCLYVFPAKVEPAKIAWE CPEKNCAQGEGSMAKKVKRLLKKQVVRIMSCSPDTQCSRDHSMEDPDKKGESKTKSEA ESASPEETPDGSASPVEMQDEGAEEPHEAGEQLPPFLLKEGRDDRLHSAEQDADDEAA DDTDDTSSVTSSASSTTSSQSGSGTSRKKSIPLSIKNLKRKHKRKKNKITRDFKPGDR VAVEVVTTMTSADVMWQDGSVECNIRSNDLFPVHHLDNNEFCPGDFVVDKRVQSCPDP AVYGVVQSGDHIGRTCMVKWFKLRPSGDDVELIGEEEDVSVYDIADHPDFRFRTTDIV IRIGNTEDGAPHKEDEPSVGQVARVDVSSKVEVVWADNSKTIILPQHLYNIESEIEES DYDSVEGSTSGASSDEWEDDSDSWETDNGLVEDEHPKIEEPPIPPLEQPVAPEDKGVV ISEEAATAAVQGAVAMAAPMAGLMEKAGKDGPPKSFRELKEAIKILESLKNMTVEQLL TGSPTSPTVEPEKPTREKKFLDDIKKLQENLKKTLDNVAIVEEEKMEAVPDVERKEDK PEGQSPVKAEWPSETPVLCQQCGGKPGVTFTSAKGEVFSVLEFAPSNHSFKKIEFQPP EAKKFFSTVRKEMALLATSLPEGIMVKTFEDRMDLFSALIKGPTRTPYEDGLYLFDIQ LPNIYPAVPPHFCYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWTSKSSLLQVL ISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEVF EQEIRQHFSTGGWRLVNRIESWLETHALLEKAQALPNGVPKASSSPEPPAVAELSDSG QQEPEDGGPAPGEASQGSDSEGGAQSLASASRDHTDQTSETAPDASVPPSVKPKKRRK SYRSFLPEKSGYPDIGFPLFPLSKGFIKSIRGVLTQFRAALLEAGMPECTEDK" BASE COUNT 1119 a 1271 c 1328 g 891 t ORIGIN 1 ccacgcgtcc gaagatcttc tccagcgtcc agtggctgtc aggtgtcaag cccgtgctca 61 gcaccaagag caagttccga gtggtggtgg aagaggtgca ggttgtagag ttgaaagtta 121 catggattac caagagtttc tgtccagggg gcacggacag cgtcagcccc ccaccctctg 181 tcatcaccca ggaaaaccta ggcagggtga agcgtctcgg atgctttgac catgctcagc 241 ggcagcttgg ggagcgctgt ctgtatgtct tcccagccaa ggtagagcca gccaagattg 301 cctgggaatg tccagaaaaa aactgcgccc agggggaggg ctctatggcc aagaaggtga 361 agcgcctgtt gaagaagcag gttgtgcgga tcatgtcatg ctccccagac acccagtgtt 421 cccgggacca ttccatggaa gacccagaca agaaggggga atccaaaacc aagagcgaag 481 cggagtctgc cagccctgag gagacgcccg atggctctgc cagtccagtg gagatgcagg 541 acgagggtgc agaggagccc cacgaggcag gagagcagct gcccccattc ctgctaaaag 601 aaggcagaga tgacaggctg cactcggcag agcaggacgc agatgatgag gctgctgatg 661 acacggacga caccagttcg gtgacctcct ctgccagctc caccacttcc tcccagagcg 721 gcagcggcac gagtcgcaaa aagagcatcc ccttgtccat caagaactta aagcgcaaac 781 acaagaggaa gaagaataaa atcactcgag acttcaagcc aggggacagg gtggcagtgg 841 aggtggtgac cacgatgacc tcagccgacg tgatgtggca ggatggctcc gtggaatgca 901 acatccgctc caacgacctc ttccctgtgc accacctgga caacaacgag ttctgccctg 961 gagacttcgt ggtagataag cgagtccaga gctgtccaga ccctgctgtc tacggtgtgg 1021 tacagtctgg ggaccacatc ggccgtacct gcatggtgaa gtggttcaag ctgaggccga 1081 gtggggacga cgtggagctg attggagaag aggaagatgt gagtgtttac gacattgctg 1141 accaccctga ctttaggttc cgtacaactg acatcgtcat ccgcatcggc aatactgagg 1201 atggggctcc tcacaaggag gatgagccat cggtgggcca ggtggcccgt gtggacgtca 1261 gcagcaaggt ggaggtggtg tgggctgaca actcaaagac catcatcctg ccccagcact 1321 tgtacaacat agagtctgag attgaggagt cagactacga ttcggtagaa ggcagcacca 1381 gcggggcatc ctcggatgaa tgggaagatg atagtgacag ctgggagacg gacaatgggc 1441 tggtggagga cgagcacccc aagatagagg agccccccat cccacccctg gagcagccgg 1501 tggcccctga ggacaaggga gtggtgatca gtgaagaggc agccacagct gccgtccagg 1561 gggctgtggc catggctgcc cccatggccg ggctgatgga gaaggctggc aaggacgggc 1621 cacccaagag cttccgggag ttgaaagagg ccatcaagat cctggagagc ctcaagaaca 1681 tgactgtgga gcagctgctg acgggctcgc ccacctctcc gactgtggag cctgagaagc 1741 caactcggga gaagaagttt ctggatgaca tcaagaagct acaggaaaac ctcaagaaga 1801 ccctggacaa tgtggccatt gtagaggagg agaagatgga agcagtgccc gacgtagagc 1861 gcaaggagga caagcccgag gggcagtcac ctgtgaaggc tgagtggccc agcgaaaccc 1921 cggtgctgtg ccagcagtgt ggcggcaagc ctggcgtcac cttcaccagc gccaagggcg 1981 aggtcttctc cgtactggag tttgcaccct caaatcattc ttttaagaaa attgagttcc 2041 agcctccaga agccaagaag ttcttcagca cagtgcggaa ggagatggcg ctgctggcta 2101 cctcactgcc tgagggcatc atggtcaaga cttttgaaga tagaatggac ctcttctcag 2161 ctctcatcaa gggccccact cgaaccccct acgaggatgg cctctacttg tttgacatcc 2221 agctccccaa catctaccca gccgtgcccc cccacttctg ctacctctcc caatgcagtg 2281 gccgcctgaa ccccaacctg tatgacaatg ggaaggtgtg tgtcagcctc ctgggcacct 2341 ggattggaaa ggggacagag aggtggacaa gcaagtccag ccttctccag gtgctcatct 2401 ccatccaagg tctgatcctg gtaaatgaac catactacaa cgaagccggc ttcgacagtg 2461 accgaggcct gcaggaaggc tatgaaaaca gtcgctgtta caatgagatg gcgctgatcc 2521 gcgtggtgca gtccatgacc cagctggtgc ggcggccccc cgaggtcttt gagcaggaga 2581 tcaggcaaca ctttagcact ggtggctggc ggctggtgaa ccgtatcgag tcctggctgg 2641 aaacccatgc cctgctggag aaggcccagg cactgcccaa cggggtgccc aaggccagca 2701 gctcgccaga gcccccagct gtagccgagc tgtcagactc cggccaacaa gaacctgagg 2761 atggagggcc agccccagga gaggcctccc agggctcaga ctcagagggc ggtgcccaga 2821 gcctggcctc agctagcagg gaccacacag accagacttc ggagaccgca ccagacgcat 2881 cggtgccacc cagtgtgaaa ccaaagaagc ggagaaagag ctaccggagc ttcttacctg 2941 agaagagtgg ctaccctgac atcggcttcc ccctcttccc actttccaag ggtttcatca 3001 agagcatccg gggtgtcctg acgcagttcc gggctgccct gctagaggca ggcatgccgg 3061 agtgcacaga ggacaagtag ctgccaggca cagaggaaag agcatcaccg tgggagaggc 3121 cagccgccgc ctgctcactc ccccccggaa tcacccctct tcccatgccc ctctgtcccc 3181 actgcaaacc cactgccctc ttctccccaa ggtgagtttg atgctgaagt gcaagaagtg 3241 tgttgagatg ctgccgtttc tattttgaag cgagctttca acaggcgggt cccctgtggc 3301 aaagaaaatc ggaaccctgt tgccgatttt ccatttgtca ccccagcaga atgtccggca 3361 cttgctccct tgctgcccct tctcaggtca gaggcgggtg ttccagggcc tgccgcgggg 3421 ctctctgggc cggttccctg cagacccgca ggagagcaca tgtgccttgc atgaagtgtg 3481 ggttgcgcca acaattcccc tggtcccttt caacctgttt agttcaactc aagcctccct 3541 gtgtcccaga ccctcctgct gccaccacca cccaggtcct ccctagtcct ccagcgtcaa 3601 cactatccct tgggagttgt agctgctgtc actgactccc ggctatacat ggcctgtcga 3661 ccacgttata gccctcaggc ctgttgaact tgctctctaa gagaggttgg gaccaggcta 3721 ggttccgggt gacgcccagg agaggtggtg gccttcacac atgcacatgg agttgaggac 3781 cagggagctg cagggaaagc aacagctata ggtgccttgc tcttctgtcg gaggctgctg 3841 ggggcaagag cagctgcaca aggccagggc aagtgctagg gcccctcccc catcacatgg 3901 tcacactggg acaggcgtgc agctcactga actccaagcg agccagccct ctcttggact 3961 agaaggccta ctgtcagccc ttcgcttaca aactgcaggc tcaatccgaa ggggacggcc 4021 ggcgggggct ctcctagtgc ccagagacag gcccagaggt ttacaagttt tctaagcttt 4081 tgataatgtg aagctccagg ccgagaggat gctgttgagc acattgcagc tatgtaattt 4141 ttggtgtatg tatgtaatat ttaaggttgg aaaaaaaact caaaagcaaa gatattaact 4201 cttattagaa aaaaagacaa aaaaaaagcc aaagcatgat gcgtcttgtc agccttaagt 4261 gggctccaca cctgtgctgt gctgtgaccg cccagccagc agagctgcgg gaggatggag 4321 ccggaccaca caccgtggca tttggaaccg agtcggtatc ttgtttgaga aacacccgga 4381 gtgactggtg gggctgtgct tcccagtgca ttgtacatgt ggagatgtga atgcctactg 4441 cttacgatat ctgtataaag tgctgtgtga ttaaactttt ttttacttgc attttttttt 4501 tttttttttt ttgttggctc attagcaaga caaggtgaca ccattaaacc tccctctgcc 4561 attcatctgg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //