LOCUS BC036793 2239 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens sodium channel, voltage-gated, type II, beta, mRNA (cDNA clone MGC:46170 IMAGE:5764346), complete cds. ACCESSION BC036793 VERSION BC036793.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2239) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2239) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 79 Row: p Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 56699490. FEATURES Location/Qualifiers source 1..2239 /db_xref="H-InvDB:HIT000051814" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:46170 IMAGE:5764346" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2239 /gene="SCN2B" /db_xref="GeneID:6327" /db_xref="HGNC:HGNC:10589" /db_xref="MIM:601327" CDS 169..816 /gene="SCN2B" /codon_start=1 /product="sodium channel, voltage-gated, type II, beta" /protein_id="AAH36793.1" /db_xref="GeneID:6327" /db_xref="HGNC:HGNC:10589" /db_xref="MIM:601327" /translation="MHRDAWLPRPAFSLTGLSLFFSLVPPGRSMEVTVPATLNVLNGS DARLPCTFNSCYTVNHKQFSLNWTYQECNNCSEEMFLQFRMKIINLKLERFQDRVEFS GNPSKYDVSVMLRNVQPEDEGIYNCYIMNPPDRHRGHGKIHLQVLMEEPPERDSTVAV IVGASVGGFLAVVILVLMVVKCVRRKKEQKLSTDDLKTEEEGKTDGEGNPDDGAK" BASE COUNT 482 a 628 c 670 g 459 t ORIGIN 1 gccggccata ttagagagat ggaaataaag cttccttaat gttgtatatg tctttgaagt 61 acatccgtgc attttttttt agcatccaac cattcctccc ttgtagttct cgccccctca 121 aatcaccctc tcccgtagcc cacccgacta acatctcagt ctctgaaaat gcacagagat 181 gcctggctac ctcgccctgc cttcagcctc acggggctca gtctcttttt ctctttggtg 241 ccaccaggac ggagcatgga ggtcacagta cctgccaccc tcaacgtcct caatggctct 301 gacgcccgcc tgccctgcac cttcaactcc tgctacacag tgaaccacaa acagttctcc 361 ctgaactgga cttaccagga gtgcaacaac tgctctgagg agatgttcct ccagttccgc 421 atgaagatca ttaacctgaa gctggagcgg tttcaagacc gcgtggagtt ctcagggaac 481 cccagcaagt acgatgtgtc ggtgatgctg agaaacgtgc agccggagga tgaggggatt 541 tacaactgct acatcatgaa cccccctgac cgccaccgtg gccatggcaa gatccatctg 601 caggtcctca tggaagagcc ccctgagcgg gactccacgg tggccgtgat tgtgggtgcc 661 tccgtcgggg gcttcctggc tgtggtcatc ttggtgctga tggtggtcaa gtgtgtgagg 721 agaaaaaaag agcagaagct gagcacagat gacctgaaga ccgaggagga gggcaagacg 781 gacggtgaag gcaacccgga tgatggcgcc aagtagtggg tggccggccc tgcagcctcc 841 cgtgtcccgt ctcctcccct ctccgccctg tacagtgacc ctgcctgctc gctcttggtg 901 tgcttcccgt gacctaggac cccagggccc acctggggcc tcctgaaccc ccgacttcgt 961 atctcccacc ctgcaccaag agtgacccac tctcttccat ccgagaaacc tgccatgctc 1021 tgggacgtgt gggccctggg gagaggagag aaagggctcc cacctgccag tccctggggg 1081 gaggcaggag gcacatgtga gggtccccag agagaaggga gtgggtgggc aggggtagag 1141 gagggggccg ctgtccacct gcccagtgct tggcctggca gtggcttcag agaggacctg 1201 gtggggaggg agggctttcc tgtgctgaca gcgctccctc aggagggcct tggcctggca 1261 cggctgtgct cctcccctgc tcccagccca gagcagccat caggctggag gtgacgatga 1321 gttcctgaaa cttggagggg catgttaaag ggatgactgt gcattccagg gcactgacgg 1381 aaagccaggg ctgcaggcaa agctggacat gtgccctggc ccaggaggcc atgttgggcc 1441 ctcgtttcca ttgctagtgg cctccttggg gctcctgttg gctcctaatc ccttaggact 1501 gtggatgagg ccagactgga agagcagctc caggtagggg gccatgtttc ccagcgggga 1561 cccaccaaca gaggccagtt tcaaagtcag ctgaggggct gaggggtggg gctccatggt 1621 gaatgcaggt tgctgcaggc tctgccttct ccatggggta accaccctcg cctgggcagg 1681 ggcagccaag gctgggaaat gaggaggcca tgcacagggt ggggcagctt tctttggggc 1741 ttcagtgaga actctcccag ttgcccttgg tggggtttcc acctggcttt tggctacaga 1801 gagggaaggg aaagcctgag gccggcataa ggggaggcct tggaacctga gctgccaatg 1861 ccagccctgt cccatctgcg gccacgctac tcgctcctct cccaacaact cccttcgtgg 1921 ggacaaaagt gacaattgta ggccaggcac agtggctcac gcctgtaatc ccagcacttt 1981 gggaggccaa ggcgggtgga ttacctccat ctgtttagta gaaatgggca aaaccccatc 2041 tctactaaaa atacaagaat tagctgggcg tggtggcgtg tgcctgtaat cccagctatt 2101 tgggaggctg aggcaggaga atcgcttgag cccgggaagc agaggttgca gtgaactgag 2161 atagtgatag tgccactgca attcagcctg ggtgacatag agagactcca tctcaaaaaa 2221 aaaaaaaaaa aaaaaaaaa //