LOCUS BC036754 3443 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens claudin 12, mRNA (cDNA clone MGC:45162 IMAGE:5201423),
complete cds.
ACCESSION BC036754
VERSION BC036754.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3443)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3443)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC036754.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: n Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37537523.
FEATURES Location/Qualifiers
source 1..3443
/db_xref="H-InvDB:HIT000051794"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45162 IMAGE:5201423"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3443
/gene="CLDN12"
/db_xref="GeneID:9069"
/db_xref="HGNC:HGNC:2034"
CDS 129..863
/gene="CLDN12"
/codon_start=1
/product="claudin 12"
/protein_id="AAH36754.1"
/db_xref="GeneID:9069"
/db_xref="HGNC:HGNC:2034"
/translation="MGCRDVHAATVLSFLCGIASVAGLFAGTLLPNWRKLRLITFNRN
EKNLTVYTGLWVKCARYDGSSDCLMYDTTWYSSVDQLDLRVLQFALPLSMLIAMGALL
LCLIGMCNTAFRSSVPNIKLAKCLVNSAGCHLVAGLLFFLAGTVSLSPSIWVIFYNIH
LNKKFEPVFSFDYAVYVTIASAGGLFMTSLILFIWYCTCKSLPSPFWQPLYSHPPSMH
TYSQPYSARSRLSAIEIDIPVVSHTT"
BASE COUNT 996 a 628 c 629 g 1190 t
ORIGIN
1 ggctcagatt attgctactc tgtattcaga tcttcatgtg tctcttctaa gctgaataaa
61 gctgttttgg aactgtcagg tacctcaaag cgtaatctga ctgacagtac tccacaagct
121 tgcctgccat gggctgtcgg gatgtccacg cagccacagt cctttccttc ctgtgtggaa
181 tcgcctcagt agcaggcctc tttgcaggga ctctgcttcc caactggaga aaattacgat
241 tgatcacatt caacagaaac gagaagaacc tgactgttta cacaggcctg tgggtgaaat
301 gtgcccggta tgacgggagc agtgactgcc tgatgtacga cactacttgg tactcatcag
361 ttgaccagct ggacctgcgt gtcctccagt ttgccctacc cctcagcatg ctgatcgcca
421 tgggtgccct gctgctctgc ctgattggaa tgtgcaacac tgccttcagg tcctcggtgc
481 ccaacatcaa actggccaag tgtctggtca atagtgcagg ttgccacctg gtggctgggc
541 tgctattttt cctggcaggt actgtgagcc tctccccatc tatctgggtc atcttttata
601 acatccatct gaacaagaag tttgagccag tcttttcatt tgactatgca gtgtatgtca
661 ctattgctag tgctgggggc ctgtttatga cttcccttat actatttatt tggtattgta
721 catgcaaatc tttgccttct cctttctggc aaccattgta ctcccatcca cccagtatgc
781 atacttactc acagccctat tcagcacgct ctcgcctctc tgccattgaa attgacattc
841 cagtagtttc acacaccact taatggggaa atagttaatt gttaaagaaa acttcttgta
901 gcctcacatt ccccttgtgc aaagagctct tttggaccta catacatttt cctttgtttt
961 tgaccaatca atgaagccaa atttatatgt cctagtagaa tgaagtgctg ctagttttta
1021 tgagaagtat attatattaa atgtgaattt tttaaatttt gcttcttata ctggaaggaa
1081 ttttagcctt catattgata tctaattaat tatttaagtg gaagaggcct gcatcacaat
1141 tgaggtaatg tagagcaaca tgttaaagaa tgatggttag cagaagctgt tgtatacaat
1201 cttcatgaaa atttcagtgt gtatttttct ttttctataa tacctttaac tgcaaagaaa
1261 aggcagtttc aaatataaga aatttatttc aggtaagggt aatattttaa tagtagtcaa
1321 taatctagct taaggctgta actcttctat cggggctaat tgtatgaata ggtgtcagta
1381 tgttgaagat tactttcttt tgtgactttc ttctacctca tgccactgtt taaaagtaaa
1441 atgtatttta atgatgttag aataagacta ccattctaaa tatcacctac ttatgaataa
1501 catgtaataa tttttaacat taatgattcc ataaattgta ttattgggat tagaatgtgc
1561 tttatgacag gttagtgttt cctctgaggc agaaaactct tttttggaga tatcttccat
1621 caagcagtac tcgtgcccat atacaatctc ttagtggcta ggagaaataa ataaaagggc
1681 cataatggtt tgttctcttt cagacataat ttagtagggg acaagaagtc tgttcttcag
1741 tgagtacact agagatttac tctggtgact gccttttgag ttatgggtga agtaaggtat
1801 ggctttacca taaccttgat tcattcaccc ttgattcatt tctcgccccc gtcactgatt
1861 atttccttga gcatatatct ctgcctaaca ctttagtagg tgctatagag gatacatgaa
1921 aagtatgaga tctggttcca tccagtaaga cattttaata gagaagatca aaatgttacc
1981 tggcagttgg ggaataatct gacttcgttg gcagttggcc ttaacttctt aatcattgat
2041 ccaggaatat ttcaaccaga gacacaactt tctggcagac agacaaattg tacaacacca
2101 acaatatcct ggaccttgaa attctgttta cttcagtcca ttgtatcctt taaggcacct
2161 gtgctagcct agattttgta ataacactga tttatgagaa tggacaaaag tggtagggaa
2221 attgttccct ctccacttct gaaagtatga tgatgtatta aggatggagg agttattaaa
2281 aatgtctctt ctgatgaggt aacaattaga tgaaaccatg ttaaagctga gatgaacact
2341 tagaaattca gggatattgg gtctttagcc ttatgaattt gagctgctta tttaattggt
2401 gtaatttact acatattagt actatattcg taaggatttt ttattaacca ttacagattt
2461 tacaaacagc tagttatatg gtaaacagat tattatgcct ttttgcaatt ctgaatatga
2521 ttctagtatt tgtgtagatg tatttggtac tttttcccct aattccaaca ctagtttata
2581 tatatagcga ataaatctag ttgtataaat ttttaaatgc cgtcagtaga aagcacacaa
2641 ggttatgatt tttttaatta ctggcttctg atttctttca cttctgatcc ttttcctttt
2701 tctcagatgt agctgagtct tgatcatttt aagacaacga tgggtagaat tttgagatta
2761 atgttaattt tccctttttg ttaatttcag tcccctctca ctatgctttt gtccagaagg
2821 atcaagaatt ctaccatccc ttgggtcttt gtgtataaac aatgttaaat aaaggtagac
2881 tcagtcttta agatattaga cagttttttt agtccatggg attgtaaata taaacattaa
2941 ctttcctata agaatatttt ggctttgtaa tctatagcct caaattggta tttattatgg
3001 attcactaga caaacagctg tttccttatt gtcttttttc tttagtgttt ctgatttgct
3061 atcagtagct gtttttaaag ccgtccaagg aaaataatta tttacagttt ttgaagtcac
3121 ttttgagccc tcatcaagct ctcattgtga tgggagggat acctttttgt tgttaaaagc
3181 ctattattgt taaaggcctt ttatggaaac caacttggaa aacaacctta aatgtggatg
3241 tatcagattt ggtttatcca gccatgggag agaaaacaaa cctaagttta ctttacttgt
3301 acatatacac tacaatggat agtatatttg ctgtaaacta caatgtaaaa cctcaataaa
3361 agtgcgctgt acttcttaat gtttattaaa agatgtattt ttacaaaaaa aaaaaaaaaa
3421 aaaaaaaaaa aaaaaaaaaa aaa
//