LOCUS BC036709 1791 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SCAN domain containing 1, mRNA (cDNA clone MGC:20960
IMAGE:4620185), complete cds.
ACCESSION BC036709
VERSION BC036709.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1791)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1791)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC036709.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: l Column: 2.
FEATURES Location/Qualifiers
source 1..1791
/db_xref="H-InvDB:HIT000094578"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20960 IMAGE:4620185"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1791
/gene="SCAND1"
/gene_synonym="RAZ1"
/gene_synonym="SDP1"
/db_xref="GeneID:51282"
/db_xref="HGNC:HGNC:10566"
CDS 1072..1611
/gene="SCAND1"
/gene_synonym="RAZ1"
/gene_synonym="SDP1"
/codon_start=1
/product="SCAN domain containing 1"
/protein_id="AAH36709.1"
/db_xref="GeneID:51282"
/db_xref="HGNC:HGNC:10566"
/translation="MAATEPILAATGSPAAVPPEKLEGAGSSSAPERNCVGSSLPEAS
PPAPEPSSPNAAVPEAIPTPRAAASAALELPLGPAPVSVAPQAEAEARSTPGPAGSRL
GPETFRQRFRQFRYQDAAGPREAFRQLRELSRQWLRPDIRTKEQIVEMLVQEQLLAIL
PEAARARRIRRRTDVRITG"
BASE COUNT 404 a 584 c 508 g 295 t
ORIGIN
1 gtgacttgct cctccttgtc ttccaccacg attgtgaggc ctccctagcc acgtggagct
61 ctcaaaggtg gagacaaccc aaatgtcctt caatggatgg ttaaatatac catggtacat
121 ctataccata gattactact cagcaataaa aaggacaaac tattgataca agcaaccact
181 tgggtgaatc tccagggaat tgtgccaagt ggaaagagcc aagcccaaat gattatacac
241 tatatgattc cagaacccac agagccgcat ttcccttggt ttcggaggac acgcgaaaaa
301 taacaacagc aaagggttct cgagcatctc cttcgcgcca gacggtgtgt tgtactttgt
361 catcgtcgca gtaaggccgg tgctatcgcc ctcctagttt gaccaagcga gaggactttc
421 tccagatggg cccctcccga gagaatggtc gccgtcccgc tctcctgttc gggtcaccac
481 cggccgggcg ccactcgaac gagccccggc cagccgtcac cctaatcatt cccgaaggag
541 gggccatcag agctacagct catcagggtc aatcagaagg ggcgcccgca cgcaaaggtc
601 acctgcaaac cgaagcggcg cacggataag gtccgggact tgaagtctat ctccaaacat
661 tcaggctcct cctccgactc ctcctcgaac tggcgctcag aggcgccacc attcggaagg
721 agcccaggcc acgcgcagct cgccctcccg caccgcgagg gcagcagccg cctcatgcga
781 ctcgagaacg ctagagggcg ccgcttccgg gagcccgcaa gcggcttccg ggtgctcgcg
841 cgccgacctg gacgcagaga agccagagac tttcgcttcc ggctgccgca ggcgcttcgc
901 tggtgcaggt aacctccgca cactctcggc cggtcccgag tccgactccc tcaagggtga
961 cgcgagctct gccctttaac cggaaacgtc tccctgctca ccccaccccc gcgcagacgc
1021 agtgctgagc acacagctac cggacaaaga gtgacgcccg gagctggagt tatggcggct
1081 acggagccga tcttggcggc cactgggagt cccgcggcgg tgccaccgga gaaactggaa
1141 ggagccggtt cgagctcagc ccctgagcgt aactgtgtgg gctcctcgct gccagaggcc
1201 tcaccgcctg cccctgagcc ttccagtccc aacgccgcgg tccctgaagc catccctacg
1261 ccccgagctg cggcctccgc ggccctggag ctgcctctcg ggcccgcacc cgtgagcgta
1321 gcgcctcagg ccgaagctga agcgcgctcc acaccaggcc ccgccggctc tagactcggt
1381 cccgagacgt tccgccagcg tttccggcag ttccgctacc aggatgcggc gggtccccgg
1441 gaggctttcc ggcagctgcg ggagctgtcc cgccagtggc tgcggcctga catccgcacc
1501 aaggagcaga tcgtggagat gctggtgcaa gagcagctgc tcgccatcct gcccgaggcg
1561 gctcgggccc ggcggatccg ccgccgcacg gatgtgcgca tcactggctg agcggtggag
1621 ctgcgggcgg ccagggccgg gcgctctgtg cggactgggg ccatgatcgg gcccgggggc
1681 ctgagcctgg gaccccaccc cgtgttaatg aaaaatgagt tttggcaaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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