LOCUS BC036705 1660 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ST6
(alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4, mRNA
(cDNA clone MGC:12606 IMAGE:4309208), complete cds.
ACCESSION BC036705
VERSION BC036705.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1660)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1660)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC036705.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: p Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28373093.
FEATURES Location/Qualifiers
source 1..1660
/db_xref="H-InvDB:HIT000051775"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12606 IMAGE:4309208"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1660
/gene="ST6GALNAC4"
/gene_synonym="SIAT3C"
/gene_synonym="ST6GALNACIV"
/db_xref="GeneID:27090"
/db_xref="HGNC:HGNC:17846"
/db_xref="MIM:606378"
CDS 183..1091
/gene="ST6GALNAC4"
/gene_synonym="SIAT3C"
/gene_synonym="ST6GALNACIV"
/codon_start=1
/product="ST6
(alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4"
/protein_id="AAH36705.1"
/db_xref="GeneID:27090"
/db_xref="HGNC:HGNC:17846"
/db_xref="MIM:606378"
/translation="MKAPGRLVLIILCSVVFSAVYILLCCWAGLPLCLATCLDHHFPT
GSRPTVPGPLHFSGYSSVPDGKPLVREPCRSCAVVSSSGQMLGSGLGAEIDSAECVFR
MNQAPTVGFEADVGQRSTLRVVSHTSVPLLLRNYSHYFQKARDTLYMVWGQGRHMDRV
LGGRTYRTLLQLTRMYPGLQVYTFTERMMAYCDQIFQDETGKNRRQSGSFLSTGWFTM
ILALELCEEIVVYGMVSDSYCREKSHPSVPYHYFEKGRLDECQMYLAHEQAPRSAHRF
ITEKAVFSRWAKKRPIVFAHPSWRTE"
BASE COUNT 340 a 533 c 472 g 315 t
ORIGIN
1 cccggttagc attcggccgg gagatgcggc agtggaatct ggaagggcgg tgaaaaacct
61 acgtcctgcc ctcgcccggc ctctccattc gtcccccggg tagagaggtg cccggctccc
121 accccttccc agccccagcc ctggagacag cagcccctag actactgagg gacagcgaca
181 gcatgaaggc tccgggtcgg ctcgtgctca tcatcctgtg ctccgtggtc ttctctgccg
241 tctacatcct cctgtgctgc tgggccggcc tgcccctctg cctggccacc tgcctggacc
301 accacttccc cacaggctcc aggcccactg tgccgggacc cctgcacttc agtggatata
361 gcagtgtgcc agatgggaag ccgctggtcc gcgagccctg ccgcagctgt gccgtggtgt
421 ccagctccgg ccaaatgctg ggctcaggcc tgggtgctga gatcgacagt gccgagtgcg
481 tgttccgcat gaaccaggcg cccaccgtgg gctttgaggc ggatgtgggc cagcgcagca
541 ccctgcgtgt cgtctcacac acaagcgtgc cgctgctgct gcgcaactat tcacactact
601 tccagaaggc ccgagacacg ctctacatgg tgtggggcca gggcaggcac atggaccggg
661 tgctcggcgg ccgcacctac cgcacgctgc tgcagctcac caggatgtac cccggcctgc
721 aggtgtacac cttcacggag cgcatgatgg cctactgcga ccagatcttc caggacgaga
781 cgggcaagaa ccggaggcag tcgggctcct tcctcagcac cggctggttc accatgatcc
841 tcgcgctgga gctgtgtgag gagatcgtgg tctatgggat ggtcagcgac agctactgca
901 gggagaagag ccacccctca gtgccttacc actactttga gaagggccgg ctagatgagt
961 gtcagatgta cctggcacac gagcaggcgc cccgaagcgc ccaccgcttc atcactgaga
1021 aggcggtctt ctcccgctgg gccaagaaga ggcccatcgt gttcgcccat ccgtcctgga
1081 ggactgagta gcttccgtcg tcctgccagc cgccatgccg ttgcgaggcc tccgggatgt
1141 cccatcccaa gccatcacac tccacaaaaa catttaattt atggatcctg cctcctgcca
1201 cgtgctgggt ggacctaagg ttccttccca ccccattctg gcgacacttg gagccatctc
1261 aggcctcatg acttgaaggg gagtggaggg gggagccgtg tctcccccca ctccctgagt
1321 aattcatggc atttgggggc tcaccccacc tccaggtctg tcaagtggcc tttgtccctg
1381 gggctgatgg cccccaactc accagcatca tgaccttgtg ccagtcctgg tcctccctcc
1441 ccagccgccc ctaccacctt ttggtgccac acttctcagg ctggccgccc tggttggggc
1501 agccgagagc ctggggttca ttggtgaagg ggccttggag ttgtgactgc cggggccgta
1561 tcaggaacgt acgggtaaac gtgtgttttc tggaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//