LOCUS BC036655 4563 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens suppression of tumorigenicity 5, mRNA (cDNA clone
MGC:33090 IMAGE:4837231), complete cds.
ACCESSION BC036655
VERSION BC036655.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4563)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4563)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: d Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47132530.
FEATURES Location/Qualifiers
source 1..4563
/db_xref="H-InvDB:HIT000051754"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33090 IMAGE:4837231"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4563
/gene="ST5"
/gene_synonym="DENND2B"
/gene_synonym="HTS1"
/gene_synonym="MGC33090"
/gene_synonym="p126"
/db_xref="GeneID:6764"
/db_xref="HGNC:HGNC:11350"
/db_xref="MIM:140750"
CDS 392..3805
/gene="ST5"
/gene_synonym="DENND2B"
/gene_synonym="HTS1"
/gene_synonym="MGC33090"
/gene_synonym="p126"
/codon_start=1
/product="suppression of tumorigenicity 5"
/protein_id="AAH36655.1"
/db_xref="GeneID:6764"
/db_xref="HGNC:HGNC:11350"
/db_xref="MIM:140750"
/translation="MTMTANKNSSITHGAGGTKAPRGTLSRSQSVSPPPVLSPPRSPI
YPLSDSETSACRYPSHSSSRVLLKDRHPPAPSPQNPQDPSPDTSPPTCPFKTASFGYL
DRSPSACKRDAQKESVQGAAQDVAGVAACLPLAQSTPFPGPAAGPRGVLLTRTGTRAH
SLGIREKISAWEGRREASPRMSMCGEKREGSGSEWAASEGCPSLGCPSVVPSPCSSEK
TFDFKGLRRMSRTFSECSYPETEEEGEALPVRDSFYRLEKRLGRSEPSAFLRGHGSRK
ESSAVLSRIQKIEQVLKEQPGRGLPQLPSSCYSVDRGKRNTGTLGSLEEPAGGASVSA
GSRAVGVAGVAGEAGPPPEREGSGSTKPGTPGNSPSSQRLPSKSSLDPAVNPVPKPKR
TFEYEADKNPKSKPSNGLPPSPTPAAPPPLPSTPAPPVTRRPKKDMRGHRKSQSRKSF
EFEDASSLQSLYPSSPTENGTENQPKFGSKSTLEENAYEDIVGDLPKENPYEDVDLKS
RRAGRKSQQLSENSLDSLHRMWSPQDRKYNSPPTQLSLKPNSQSLRSGNWSERKSHRL
PRLPKRHSHDDMLLLAQLSLPSSPSSLNEDSLSTTSELLSSRRARRIPKLVQRTNSIY
NAKRGKKRLKKLSMSSIETASLRDENSESESDSDDRFKAHTQRLVHIQSMLKRAPSYR
TLELELLEWQERELFEYFVVVSLKKKPSRNTYLPEVSYQFPKLDRPTKQMREAEERLK
AIPQFCFPDAKDWLPVSEYSSETFSFMLTGEDGGRRFGYCRRLLPSGKGPRLPEVYCV
ISRLGCFGLFSKVLDEVERRRGISAALVYPFMRSLMESPFPAPGKTIKVKTFLPGAGN
EVLELRRPMDSRLEHVDFECLFTCLSVRQLIRIFASLLLERRVIFVADKLSTLSSCSH
AVVALLYPFSWQHTFIPVLPASMIDIVCCPTPFLVGLLSSSLPKLKELPVEEALMVNL
GSDRFIRQMDDEDTLLPRKLQAALEQALERKNELISQDSDSDSDDECNTLNGLVSEVF
IRFFVETVGHYSLFLTQSEKGERAFQREAFRKSVASKSIRRFLEVFMESQMFAGFIQD
RELRKCRAKGLFEQRVEQYLEELPDTEQSGMNKFLRGLGNKMKFLHKKN"
BASE COUNT 1035 a 1330 c 1266 g 932 t
ORIGIN
1 agcggggggg tcgggggtcg ggggctgggg gctgaggact gagtcgagcc agcagcccag
61 ggcatctgtc cacgctgtca gaggagcctc tgggcgtggg gctggccctt agagggctac
121 tgcgctgctt aacttgcctt tcacagaaaa ccactggagg agatactcac aaaaatgaag
181 gggaagaaca ggaaacagga agacatgaga tgaaggaaac aggagattca acatggattt
241 cacacccttt ggagagtttc tttcttggat aattcaggaa gatgagagac tgcttaggcg
301 ccaccactag taccatgagt ccctgcactg gttaaagcca tcgccacaac ctggacaggc
361 agcaagggct ctgggtttgc agagagccga aatgaccatg actgccaaca agaattccag
421 catcacccac ggagctggtg gcactaaagc ccctcggggg actctgagca ggtctcagtc
481 agtctctcca cctccagttc tctccccacc aaggagtccc atctacccgc tcagtgatag
541 tgaaacctca gcctgcaggt accccagcca ctccagctcc cgggtgctcc tcaaggaccg
601 gcacccccca gctccttcac cccagaatcc tcaagatccc tccccagata cttccccacc
661 cacctgtccc ttcaagaccg ccagcttcgg ttatttggac agaagccctt cggcgtgcaa
721 gagagacgcc caaaaggaaa gtgtccaagg cgcagcccag gatgtagcag gggtcgctgc
781 ctgcctcccc cttgcccaga gcacgccatt cccggggcca gcagctggcc cccggggcgt
841 cttgctgacc cgtaccggta cccgcgccca cagcctgggc atccgggaga agatatcagc
901 atgggaaggt cgccgagagg cgtcgcccag gatgagcatg tgtggagaga agcgggaggg
961 ctctgggagc gagtgggcgg ccagtgaggg ctgccccagc ctgggctgtc ccagcgtggt
1021 gccgtccccc tgcagctctg aaaagacctt tgatttcaag ggcctccgga ggatgagcag
1081 gaccttctcc gagtgttcct acccagagac tgaggaggag ggagaggcgc tccctgtccg
1141 ggactctttc taccggctgg agaaacggct gggccggagt gagcccagcg ccttcctcag
1201 ggggcatggc agcaggaagg agagctcagc agtgctgagc cggatccaga aaattgaaca
1261 ggtcctgaag gagcagccgg gccgggggct cccccagctc cccagcagct gctacagcgt
1321 ggaccggggg aaaaggaaca ctggaacctt gggctccttg gaggagccgg cagggggcgc
1381 gagtgtgagc gctggcagcc gggcagtcgg agtggctggt gttgcggggg aggcgggccc
1441 acccccagag agggaaggca gtggttccac taagcccggg acccctggaa atagccctag
1501 ctcccagcgg ctgccatcga agagttccct cgatcccgct gtgaaccctg tccccaaacc
1561 caagcgcacc tttgaatacg aggctgacaa gaaccccaag agtaagccca gtaatggtct
1621 acctccttca cccacacctg ctgctccacc tcccttgccc tccaccccag ccccgccagt
1681 cacccggaga cccaagaagg acatgcgtgg tcaccgcaag tcccagagca gaaaatcctt
1741 tgagtttgag gatgcatcca gtctccagtc cctgtacccc tcttctccca ctgagaatgg
1801 tactgagaac caacccaagt ttggatccaa aagcacttta gaagaaaatg cctatgaaga
1861 tattgtggga gatctgccca aggagaatcc atatgaggat gtggacttaa agagccgaag
1921 agcaggacga aaatcccagc aactgtctga gaactccttg gactctttgc acaggatgtg
1981 gagtcctcag gacaggaagt acaacagccc gcccacacag ctttccctga aacccaacag
2041 ccagtccctg cgcagtggga actggtcaga aaggaagagc caccggctgc cacgattacc
2101 caagaggcac agccatgacg acatgctgct gctggctcag ctgagtctgc cgtcctcacc
2161 ctccagcctc aatgaagaca gcctcagcac caccagcgag ctgctgtcca gccgccgggc
2221 ccgccgcatt cccaagcttg tccaaagaac taactccatc tacaatgcca agagaggaaa
2281 gaagagatta aaaaagttgt ctatgtccag cattgaaaca gcatcactga gagatgaaaa
2341 cagtgagagc gagagcgact ctgatgacag gttcaaagcc cacacacagc gcctggtcca
2401 catccagtcg atgctgaagc gcgcccccag ctatcgcacg ctggagctgg agctgctgga
2461 gtggcaggag cgggagcttt ttgagtactt tgtggtggtg tccctcaaga agaagccatc
2521 gcgaaacacc tacctccccg aagtctccta ccagtttccc aagctggacc gacccaccaa
2581 gcagatgcga gaggcagagg aaaggctcaa agccattccc cagttttgct tccctgatgc
2641 caaggactgg cttcctgtgt cagagtatag cagtgagacc ttttctttca tgctgactgg
2701 ggaagatggc ggcagacgct ttggctactg caggcgctta ctgccaagtg ggaaagggcc
2761 ccggttgcca gaggtgtact gtgtcatcag ccgccttggc tgcttcggct tgttttccaa
2821 ggtcctagat gaggtggagc gccggcgtgg gatctccgct gcattggtct atcctttcat
2881 gagaagtctc atggagtcgc ccttcccagc cccagggaag accatcaaag tgaagacatt
2941 cctgccaggt gctggcaatg aggtgttaga gctgcggcgg cccatggact caaggctgga
3001 gcacgtggac tttgagtgcc tttttacctg cctcagtgtg cgccagctca tccgaatctt
3061 tgcctcactg ctgctggagc gccgggtcat ttttgtggca gataagctca gtaccctctc
3121 cagctgctcc cacgcggtgg tggccttgct ctaccccttc tcctggcagc acaccttcat
3181 tcctgtcctc ccggcctcca tgattgacat cgtctgctgt cccaccccct tcctggttgg
3241 cctgctctcc agctccctcc ccaaactgaa ggagctgcct gtggaggagg cgctgatggt
3301 gaatctggga tctgaccgat tcatccgaca gatggacgac gaagacacgt tgttacctag
3361 gaagttacag gcagctctgg agcaggctct ggagaggaag aatgagctga tctcccagga
3421 ctctgacagc gactccgacg atgaatgtaa taccctcaat gggctggtgt cggaggtgtt
3481 tatccggttc tttgtggaga ccgttgggca ctactccctc tttctgacac agagtgagaa
3541 gggagagagg gcctttcagc gagaggcctt ccgcaaatct gtggcctcca aaagcatccg
3601 ccgctttctt gaggttttta tggagtctca gatgtttgct ggcttcatcc aagacaggga
3661 gctaagaaag tgtcgggcaa agggcctttt tgagcagcga gtggagcagt acttagaaga
3721 actcccagac actgagcaga gtggaatgaa taagtttctc cgaggtttgg gcaacaaaat
3781 gaagtttctc cacaagaaga attaagcctc cttctcagta gcagagtcca gtgccttgca
3841 gagcctgaag cctggggaga aggcccagcc tgggaccctc tgggctgctg tggctcctct
3901 gcccccacag atcctatcct ccaagccagc ccacctctgc cttcatcata tcccaggata
3961 ctgtttgtaa ataatctgct gtaagctttc ttaactgttt tttgtaacaa gcaaagagaa
4021 tatggcaaat atttgtatat tcccaagggg ccgggtgctt tcctgtcctg ccagagcatg
4081 gatgaagttt cgctgggtgc tcgtgactgg ccagttttgt gcagctgact gtctcagcca
4141 aaccactgat cttccctgga ggccttcggc ctgcctgcct gcctgcctga ggtccccgct
4201 gccagtcccg ggccctggag agcagatgct gtcttgttat gtacaggagg accttttaaa
4261 aaaatcaagt ttctattttt tgctggtagt ccgcataccc ataccctctg tttttgaaag
4321 gcaaaggcca atcagtcccc atttgtagca tggcaccagg gtcttaggcc tagtcctctc
4381 attcctccca ccctccgaga tggtcagtgt gtcatgggaa gcccaccccc agctctgcca
4441 gtgctctctg ggcctggctc ccagtcagtg gtggccacga tgcggtacag ggcatccctc
4501 cttcccatct acgggtgttc tcaataaaca atgtacagtt gtttgggcaa aaaaaaaaaa
4561 aaa
//