LOCUS BC036557 2360 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ATP-grasp domain containing 1, mRNA (cDNA clone
IMAGE:4310128), complete cds.
ACCESSION BC036557
VERSION BC036557.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2360)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2360)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Linehan
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: c Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2360
/db_xref="H-InvDB:HIT000051743"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4310128"
/tissue_type="Kidney, renal carcinoma (ascites)"
/clone_lib="NIH_MGC_45"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2360
/gene="ATPGD1"
/db_xref="GeneID:57571"
/db_xref="HGNC:HGNC:29268"
CDS 177..1334
/gene="ATPGD1"
/codon_start=1
/product="ATPGD1 protein"
/protein_id="AAH36557.1"
/db_xref="GeneID:57571"
/db_xref="HGNC:HGNC:29268"
/translation="MTEHRRDEENARLLAELVRARGLKLDGCFSYWDDCLVLTALLCQ
ELGLPCSSPAALRLAKQKSLTQLHLLHHHGPPWPAPSLHAVPCCPLESEADVERAVHQ
VPLPGVMKLEFGAGAVGVRLVEDAPQCHEHFSRITRDLQGEADHPGIGLGWGNAMLLM
EFVEGTEHDVDLVLFGGRLLAAFVSDNGPTRLPGFTETAACMPTGLAPEQEAQMVQAA
FRCCLGCGLLDGVFNVELKLTGAGPRLIEINPRMGGFYLRDWILELYGVDLLLAAVMV
ACGLRPALPTRPRARGHLVGVMCLVSQHLQALSSTASRETLQALHDRGLLRLNLLEEA
LVPGEYEEPYCSVACAGPSPTEARLRLLGLCQGLGIDGPSYPVAHFLSHFK"
BASE COUNT 453 a 761 c 652 g 494 t
ORIGIN
1 tgtttgtgta ctcgtatccc ctgaaggggc catcctaggc cccatcctat ccccctagca
61 cccagtacta gctgacctgg atatgcccca ccctgtggct tctgcagctg cacctcgtgg
121 agtcagaccc caaccacttt gcatcccagt tggtacagac cttcatccac tttgacatga
181 cagagcaccg gagggatgag gagaacgcac ggctgctggc agagttggtg cgggctcgcg
241 gcctcaagct agatggctgc ttctcctact gggatgactg cctggtgctc acagccctgc
301 tctgccagga gctaggtctg ccctgcagct ccccagctgc cttgcgcctg gctaagcaga
361 agagcctcac ccagctgcac ctgttgcacc accatggccc accctggcct gcgccctccc
421 tccatgctgt gccctgctgc ccactggaga gtgaggctga tgtggagagg gccgtgcacc
481 aggtacccct gccaggtgtc atgaagctgg agttcggggc aggtgcagtg ggtgtccggc
541 tggtagagga tgcgccacag tgccatgagc acttttcccg gattacccga gacttgcagg
601 gcgaggccga ccacccaggc attgggctgg gctggggcaa tgccatgctg ctgatggagt
661 ttgtggaggg caccgagcac gacgtggacc tggtgttgtt tggtgggcgg ttgctggctg
721 cctttgtctc cgacaatggc cctacgaggc tgcctggctt cactgagacg gcggcctgca
781 tgcccaccgg gctggcacca gagcaggagg cacagatggt tcaggcagcc ttccgctgtt
841 gcctgggctg cgggttgctc gatggagtct tcaacgtgga gctcaagctg accggggctg
901 ggcctcggct tatcgagatc aacccccgca tgggtggctt ctacctgcgt gattggatcc
961 tggagctcta tggtgttgac ctgctgctgg ctgctgttat ggtggcctgt ggcttgcgtc
1021 ctgccctgcc cacccgccca cgtgctcgtg gccatctggt gggcgtcatg tgccttgtgt
1081 cccagcacct gcaggccctg agttccaccg ccagccgtga gaccctgcag gccctgcacg
1141 accgtggact gctacgcctc aatctgctgg aggaggccct ggtgcctggc gagtatgagg
1201 agccctactg cagtgtggcc tgtgccggac ccagccccac cgaggcccgt ctccgcctgc
1261 tgggcctctg ccagggcctg ggcatcgatg ggcccagcta ccctgttgcc cacttcctgt
1321 ctcacttcaa atagcactgg ggtcaggggg cagggaagca gtgctgggtg gaggcactgt
1381 ggtgccctct gctccctgga gctcttcctg cttctctccc catcaccatg ccccagcccc
1441 agcctggccc gctgcaatgc ctaggtctgt tccagagcag cagggcaatt tagacaccaa
1501 ggcatcctgg actcaagggc ctcttgccct cccgaaggcc ccagtccagc ctacagcttc
1561 cccagcattc tagccttgga gaaatgacaa tggccacaca cacacacaca cacacacaca
1621 cacacacacc tctgacgcca gctccccagg tgggagtggg cccaaaccca gcccctcctg
1681 tccacctctc caggtctcac tctcttcctg ccatctacaa gaggagagga cctggctggg
1741 ccccaagcct tggacaaatc ctgggaaaac ctgagactag aacccttgtc ttcctcttac
1801 ccaaattcta ggatagctct gaagcctgct ggaaacttgg tggcatccaa cctgcctcat
1861 tcggcctgac cggtagaggc aggtggcctg tggacagaag taatcctctt tctgctcacc
1921 ccaggcagac acaactgcct atgttccccc gatgagagga aacaggctga gagaagaaaa
1981 atgactgctc caggattata ccacagtgga gagcgggtca caggacatga tgcagggtcc
2041 aggtttctgt tttgatcaag tcttacatgc ccattcagct tctaggcccc cctcacctcc
2101 ctgccctcat tcacaagtgg ccctgagaca cgtgaacacc tccctcctat gcatcacaaa
2161 ccttctccac cgagctttgg tgctttggcc tctggcacac ctaactagca ttggcagagg
2221 agagtctaca ctctcttcct cattcaggga agatgcttta agaaatcctg cctctgtgca
2281 gcagaggagc tggaggcagc tccccaggca tccctcccca aataaaggct tatgtactgg
2341 taaaaaaaaa aaaaaaaaaa
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