LOCUS BC036538 3837 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens synaptotagmin IV, mRNA (cDNA clone MGC:33834
IMAGE:5260337), complete cds.
ACCESSION BC036538
VERSION BC036538.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3837)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3837)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC036538.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: f Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222118.
FEATURES Location/Qualifiers
source 1..3837
/db_xref="H-InvDB:HIT000051736"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33834 IMAGE:5260337"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3837
/gene="SYT4"
/gene_synonym="HsT1192"
/gene_synonym="KIAA1342"
/db_xref="GeneID:6860"
/db_xref="HGNC:HGNC:11512"
/db_xref="MIM:600103"
CDS 99..1376
/gene="SYT4"
/gene_synonym="HsT1192"
/gene_synonym="KIAA1342"
/codon_start=1
/product="synaptotagmin IV"
/protein_id="AAH36538.1"
/db_xref="GeneID:6860"
/db_xref="HGNC:HGNC:11512"
/db_xref="MIM:600103"
/translation="MAPITTSREEFDEIPTVVGIFSAFGLVFTVSLFAWICCQRKSSK
SNKTPPYKFVHVLKGVDIYPENLNSKKKFGADDKNEVKNKPAVPKNSLHLDLEKRDLN
GNFPKTNLKPGSPSDLENATPKLFLEGEKESVSPESLKSSTSLTSEEKQEKLGTLFFS
LEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPA
FDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNRE
IIKRNVRKSSGRGELLISLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHA
KKRISKKKTHVKKCTPNAVFNELFVFDIPCEGLEDISVEFLVLDSERGSRNEVIGQLV
LGAAAEGTGGEHWKEICDYPRRQIAKWHVLCDG"
BASE COUNT 1228 a 651 c 772 g 1186 t
ORIGIN
1 gttttcagcg ctccgaaagc cggcgcttga gatccaggca agtgaatcca gccaggcagt
61 tttcccttca gcacctcgga cagaacacgc agtaaaaaat ggctccgatc accaccagcc
121 gggaagaatt tgatgaaatc cccacagtgg tggggatctt cagtgcattt ggcctggtct
181 tcacagtctc tctctttgca tggatctgct gtcagagaaa atcatccaag tctaacaaga
241 ctcctccata caagtttgtg catgtgctta agggagttga tatttaccct gaaaacctaa
301 atagcaaaaa gaagtttgga gcagatgata aaaatgaagt aaagaataag ccagctgtgc
361 caaagaattc attgcatctg gatcttgaaa agagagatct caatggcaat tttcccaaaa
421 ccaacctcaa acctggcagt ccttctgatc tggagaatgc aaccccgaag ctctttttag
481 aaggggaaaa agagtcagtt tcccctgaga gtttaaagtc cagcacttcc cttacttcag
541 aagagaaaca agagaagctg ggaactctct tcttctcctt agaatacaac ttcgagagaa
601 aagcatttgt ggtcaatatc aaggaagccc gtggcttgcc agccatggat gagcagtcga
661 tgacctctga cccatatatc aaaatgacga tcctcccaga gaagaagcat aaagtgaaaa
721 ctagagtgct gagaaaaacc ttggatccag cttttgatga gacctttaca ttctatggga
781 taccctacac acaaatccaa gaattggcct tgcacttcac aattttgagt tttgacaggt
841 tttcaagaga tgatatcatt ggggaagttc taattcctct ctcgggaatt gaattatctg
901 aaggaaaaat gttaatgaat agagagatca tcaagagaaa tgttaggaag tcttcaggac
961 ggggtgagtt actgatctct ctctgctatc agtccaccac aaacactcta actgtggttg
1021 tcttaaaagc tcgacatctg cctaaatctg atgtgtccgg actttcagat ccctatgtca
1081 aagtgaacct gtaccatgcc aaaaagagaa tctccaagaa gaagactcat gtgaagaaat
1141 gcacccccaa tgcagtgttc aatgagctgt ttgtctttga tattccttgt gagggccttg
1201 aagatataag tgttgaattt ttggttttgg attctgaaag ggggtcccga aatgaggtaa
1261 tcgggcagtt agtcttgggt gcagcagcag aaggaactgg tggagagcac tggaaagaga
1321 tctgtgacta ccccaggaga caaattgcca agtggcacgt gctctgtgat ggttagcatc
1381 ctagccgtga gttggaactt aaaggttttt actaggcaag gagaaatttt ctttctttct
1441 atattggatt gcaagcttgg gaaatcaagc tacctttttg ttgttgttgt tgttgctaga
1501 aatggattga attagtagac cagaaagtaa cttcaaatgt gtattatgat aatttcccta
1561 tttattagaa gagttggata aattttcata agatattcaa tatctccttc agattaccag
1621 tgatataact aggaatagtc agacatttta tgaatactgt gccagaatcc caaattataa
1681 atgtgacaat ctcattggaa catgtcacaa aaagttaatg tgattaagat ttaaaaacga
1741 aaagtatgcc ttgccttgtg aaaatttatc catttatctt caggttgggg aaatcaattt
1801 ttctttaaat ccaaagatac taaaaaaatg tcctccagtt tgtatttatt aattctgtca
1861 tgtgcaaatg gttgtcctgc atataaaagt atctggtcat ttcagtttgg tttgtaatta
1921 tttgatgcaa ttttatcata agagtaactc agattcattt caaaaggaca gtgaacaagc
1981 tgagaaatta ttttatcaaa gggctgagtt gagaacactg tggctgaaat ataatttttc
2041 tcccccctaa ggttacatgt gagtcaaaat tttgtaaaat ataacctcac ataagaacca
2101 tggccttgga ttattcactg cctgtcacaa gcctcagtgt ggcctgagaa atccctatgt
2161 acctttgtga aattgttgaa ttagttagtg aataaagaaa taaacttcaa ctagaaatcc
2221 agttagaagt gcaattttct tataggaaat aggtatagtg tgcaagtgta cttttaaggc
2281 catcgtttgt acccagagtc ggcatggcca cctaagtctt catttaattt attgtccccc
2341 agaaaagatt aagatgctac ttgaaaagac tgtgaagatt ttttacattg ccagataaaa
2401 agtgttactt aaccaacaaa caaatgtaag actacaaaat cgttcaagag caattctaat
2461 ataatttaca tatgttcacg caaaatatgc ttaggctgtc aaattagcac aacaaagaat
2521 gtgtttcact atcttttcta ggctaatttg tcttgagctg ttgtctatag agcagtttac
2581 agacttgtgt cttgtatcat tttccagtgc cagggttctg aaattcattc agaacctgtt
2641 agattaaagc tgcaccctgt gattatttga aaagaattag cttgagagta atgtcactat
2701 atttgagttc ttagagaagt atgagtggaa cttgagtaca gttgaattat taaatatgca
2761 agttagaaat taagtctact gaaaaattta cattttgagt caggttttgt gtcagtactt
2821 tagcagtttt tgagaatgtg tttgatatca cagtgtttgt aaattctatg aaaaatgcat
2881 tttccaaaca acttatacat gctttttatg actatgccta atgtaaagaa aatgtattac
2941 attctgtatg tacaaagatt aaaaatcaac ctcttttttg tgctttaaaa tgactttggg
3001 attaaaaaag catatttccc aatcattgtc ttcattccac tacaaagtca cctcacagca
3061 tcttgctcca ctcggcatct ctgtgaaagc aacatgaaat gaactgtagt aggtgtgtag
3121 tttggggaag tcaaatggcc attttatgta tgtgcatttg gtatcatggg ccgtggaaca
3181 gaatatatgt tggacctctg aaaagttgta aggggccaat tctaagtatt cttcacggca
3241 gccagaagtt aatggtggta gcagctgagg tatggttgtt ggacgaggcc gatttttttt
3301 tttaacatgg aacaatgaaa ccaacaacaa acatttttaa aattaaaatg gataatttgt
3361 aaatagtttt tagcttttaa aatttaaagt gtttttgagt gtgaaaagtt gagtaaaact
3421 atttgcaact ggttttcaga aaagagaaaa gaaacaacaa aggaattgaa acaggcaggg
3481 agatcttaat acctaatttc atcatttctg aaaatgtact gttttagaat gtattacaat
3541 atcaatgtga atatcttgaa tcctgttaca aatcctgcac tgtattaaac atgtaaatta
3601 attgtttgtc tgattagcca atctcaccac ccaaatgggg aggtatacat gtttgaagaa
3661 ctgtgtaact cagtaattga tttgttctga tgttgtaact caatagaagt gttttggaag
3721 gaagcatggt gtgtgagaca gtgtctgttc ttttgtgcca gctctgtatg atgtttgtaa
3781 gaccatgttt gtaagacatg aataaattgc tgcttttgcc caaaaaaaaa aaaaaaa
//