LOCUS BC036535 2638 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens schwannomin interacting protein 1, mRNA (cDNA clone
MGC:33753 IMAGE:5263291), complete cds.
ACCESSION BC036535
VERSION BC036535.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2638)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2638)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC036535.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: h Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7657539.
FEATURES Location/Qualifiers
source 1..2638
/db_xref="H-InvDB:HIT000051735"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33753 IMAGE:5263291"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2638
/gene="SCHIP1"
/gene_synonym="SCHIP-1"
/db_xref="GeneID:29970"
/db_xref="HGNC:HGNC:15678"
CDS 578..2038
/gene="SCHIP1"
/gene_synonym="SCHIP-1"
/codon_start=1
/product="schwannomin interacting protein 1"
/protein_id="AAH36535.1"
/db_xref="GeneID:29970"
/db_xref="HGNC:HGNC:15678"
/translation="MERSGQRVTTWDCDQGKHSDSDYREDGMDLGSDAGSSSSSSRAS
SQSNSTKVTPCSECKSSSSPGGSLDLVSALEDYEEPFPVYQKKVIDEWAPEEDGEEEE
EEDERDQRGYRDDRSPAREPGDVSARTRSGGGGGRSATTAMPPPVPNGNLHQHDPQDL
RHNGNVVVAGRPSCSRGRRAIQKPQPAGGRRSGRGPAAGGLCLQPPDGGTCVPEEPPV
PPMDWEALEKHLAGLQFREQEVRNQGQARTNSTSAQKNERESIRQKLALGSFFDDGPG
IYTSCSKSGKPSLSSRLQSGMNLQICFVNDSGSDKDSDADDSKTETSLDTPLSPMSKQ
SSSYSDRDTTEEESESLDDMDFLTRQKKLQAEAKMALAMAKPMAKMQVEVEKQNRKKS
PVADLLPHMPHISECLMKRSLKPTDLRDMTIGQLQVIVNDLHSQIESLNEELVQLLLI
RDELHTEQDAMLVDIEDLTRHAESQQKHMAEKMPAK"
BASE COUNT 739 a 589 c 667 g 643 t
ORIGIN
1 aggaagagat aatctgtgaa agccacagag cctgatttct gctgtgataa tcttcagcag
61 accgaggctg gggcgagaat gaggcagacc tgtttacatg gtgtgtgcag tgccttgtgg
121 aattcttaac tctattttat tgtattattt ttaatcgaaa agtagatcag atgatagcat
181 gaagtgaatc ggctgctttg gactaatggg atcttctttt ctgcattaag atcaagaact
241 tttctggaat cctctgttct ccgagtagcc ttgtcttctc tgtgtgtttt atcaatttga
301 agaacactgg caaaaatcag caaacttcat ctcccaaaaa gctctcgctc ttttttgcca
361 atacttgaag atttctgctc caaaatctac tttgagctgc ttgagcatgg tggttgataa
421 ccgaagggca aaagcatcac ttatttagtg tgtgttatag aaatttttta gacaacctta
481 ctagctaacc caggtgaccc tttacggatt tctttcaaag ccaatttgaa taaacaactc
541 ttccctctca aatgggcaag agtaactctt cagcaccatg gagaggtccg ggcagcgtgt
601 tacaacgtgg gactgtgacc agggcaagca ctctgacagt gattaccgag aggatgggat
661 ggatctaggc agtgacgccg gcagcagcag cagcagcagc cgcgccagtt cacagtccaa
721 ctccaccaaa gtgacccctt gctccgagtg caaatcttca tcgtcgccgg ggggcagcct
781 ggacttggtg tctgccctgg aggactatga ggagcccttc ccggtctacc agaagaaggt
841 gattgatgag tgggcgccgg aggaggacgg ggaggaggag gaagaggagg acgagcgcga
901 ccagcgaggg taccgggatg accgctcacc ggcccgggaa ccgggggacg taagcgccag
961 gacccgcagc ggcggcggcg ggggcaggag cgccaccacc gccatgccgc ccccggtgcc
1021 caacggcaac ctccaccagc acgaccccca ggacctcagg cacaatggca acgtggtggt
1081 ggctggccgg ccgagctgtt cccggggccg ccgggcgatc caaaagcccc agccggctgg
1141 gggccggcgc agtggccgcg gcccggcggc tggggggctc tgccttcagc ccccagacgg
1201 cgggacgtgc gtccccgaag agcccccggt gccacctatg gattgggagg cgctggagaa
1261 gcatctggcc gggctgcagt tccgggagca ggaggtacgg aaccagggcc aggcgaggac
1321 caactccacc tccgcacaga aaaatgagag agagtctatc agacagaagt tggcacttgg
1381 aagcttcttt gatgatggcc caggaattta taccagctgt agcaaaagtg gaaagccaag
1441 cctttcctcc cgactgcaga gtgggatgaa cttgcagata tgctttgtca acgacagtgg
1501 cagtgataag gacagtgatg ctgatgacag taagactgaa accagcttgg acaccccctt
1561 gtctcccatg agcaaacaga gttcttccta ttctgataga gacactactg aagaggagtc
1621 tgaatccttg gatgacatgg acttccttac aaggcaaaag aaattgcaag ctgaagccaa
1681 aatggccctt gccatggcca aaccaatggc caaaatgcaa gtagaagtgg agaaacagaa
1741 caggaaaaag tctcccgtcg ctgatcttct gccacacatg cctcatataa gtgaatgctt
1801 gatgaaaaga agtttaaaac ccaccgacct gagagacatg actattgggc agctacaagt
1861 gatagtcaat gatctccatt cccagataga aagcttgaat gaagagttgg tccagctgct
1921 tctcatccga gatgagctgc acacagagca ggatgccatg ctggtggaca ttgaagactt
1981 gaccagacat gctgaaagtc agcagaagca catggcagag aaaatgcctg caaagtgaaa
2041 agaagccatt caaccagaga acaagctaga atttattttg cttctgtggt tgtaaaaatg
2101 ctgttgctaa aggtggcgca gaaacaaata tcagtgttag tcattgataa tgtctgaagc
2161 ttaatgtcca gtgattggcc tttgcttctt aatttatttt aattttttac ttgtgccact
2221 taatatcagg cattttaata aaatattgtt acaaaaaatg tacagtactg acaccaccac
2281 aaatcatggt taataaaaga gagtagtttt aactttattt ttatttgttt agagatttta
2341 agttggaaca gtattttcca attgactact tttcattctt cactgtagtt ttaaagaaga
2401 actgtaaatg acggtgctat acaagtcaaa aaatacatgc ctgcctcgta gtgaagttgt
2461 agctctccgt aatatgtata ttttactcag ttttcaacat tttgtgaatg ttgactacct
2521 gaagttcctt tttagatgtg ctattaacat tctgttggat tcagagggtt ccttgaaagt
2581 tttatgtata aatatgtaaa ataaaaatta aaactttgtt tcaaaaaaaa aaaaaaaa
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