LOCUS BC036532 3236 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens sorting nexin 22, mRNA (cDNA clone IMAGE:5264125),
with apparent retained intron.
ACCESSION BC036532
VERSION BC036532.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3236)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3236)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC036532.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: h Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376169
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3236
/db_xref="H-InvDB:HIT000051733"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5264125"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 633 a 964 c 956 g 683 t
ORIGIN
1 gagccgagcg cgcggagcag ctggggccgg ggcgcggatg ctggaagttc acatcccgtc
61 ggtggggccc gaggccgagg ggcccaggca gagcccggag aaaagccaca tggtgttccg
121 agtggaggtg ctgtgcagcg ggcgcagaca cacggtgcca aggcgctaca gcgagttcca
181 cgcgctgcac aagcgggtga ggcggcgccg acctcccacc ggccccggcc cagcctctgt
241 ccagcccccg cccaggccct gtgaggcggg cgggcgagcc ccagcctccg ccacccccat
301 tactgcctca gtccctgcgc agccggtcag cccccgggcc tctgtgggtg ggttggggcc
361 ttcctcgccc tcggccggtc caccactcac cagggtctgt cccagtagag cccgaaggcg
421 ggggcgcggg agggcttctg gctggggcga agagggcttg agggctcagt cgggatgctg
481 tgatcgcacg cggtaaacct ccagtagatc aagaagctgt acaaagtgcc cgacttcccc
541 tcgaaacgcc tgcccaactg gaggaccaga gggttggaac agcgccggca gggcttggag
601 gcttacatcc aggtatgcga gagcacagtt ggttgccccc cggccttctg tgccaggggt
661 gtggcccaga cagagaggtg tgggggcatg gcagggaggg aacccacaac ttggggatgt
721 tattcaccac ctcaagcatc aattttctga gtctaatata ggtccaaaca cccccctctg
781 gcttgttgaa aggactgaaa gaggtaacgg acacaggtag tcccagctcc atgaaaccca
841 ggtcctgtcc gctccatggt gaggtcctgt gctgccctcc tgatggcatg tagggtgagg
901 gtccttcccc caacagcaaa gctatgccgc gtcatggggt acaacctgtg cacacagcgc
961 ccagcgccca gaagggccct gagcctggtt caacgctctg ctgtcattgt cgtgaaattc
1021 tttttttgga acaaagagcc ctgcattttc actggcactg cgctatgcaa attagtagct
1081 gggtctgatt gcaggtctcc tctgtcctct ccagggcatc ctgtacctga accaggaggt
1141 gcccaaggag ttactggaat tcctgagact tcggcacttc cccacagacc ccaaggctag
1201 caactggggg taaggggggc cgatggcggg ggccaggggc tgtcagcagt gagcaggtga
1261 ggaaaggtgt tggagggcaa gccctttctt ttcacatctg ccaggatcca gcatgaccgc
1321 cctcaccagc tctcttgacc tgggtggagg ggtttttttt ggacagactt ggttaccccc
1381 gccacctccg gaactggggc ttgttacaaa tagaagcagt ggtcccctgg gaggtgcagt
1441 tctgggctct ggtgtctcca ccccttcctc acgctccccc ggcatcccca ggcagcttac
1501 agtgtttctc ttctcttcac cctgagggag ttcctgcctg gcgacagcag gcaagtcaaa
1561 gccctagccc gcgcttggcc cctgctgccc cctagtggcc atatgctagg aggcaggcct
1621 gctgcctggg cctgtctggc ctgggccctg aagtctgttt tccctttggt gcctcctgag
1681 cccatttccc actcaccttt tccttcatgg gtccctggtg atggcaaccc cgtctccacc
1741 cctctgtggg attctgccct gcctcccgca cccatggttc atgaccctgt ttcctcccag
1801 ctcccagcag caccagcggc ctgtcctgag cttccatgtg gatccctatg tttgcaaccc
1861 ctccccaggt gaggaggtgc ctagatatgg ggctacaggg ctgggttgtg ggctttgcat
1921 ttctcggctc ctgggaccct cagacagcat ctccttcctg ctgcccacct ctggagccac
1981 tacctcctgc tcctgtcccc tggagcctgc tttgtagaca caaggaaaac aagtttggct
2041 tccctggtct ccatttcttc agcagcctga cttctttacc aagctgatgt gaaaagaatg
2101 tgacctggga atgcggaggc ttcatttggg gtggacagct gctgtctgct gccttggcag
2161 gggctcctac tcccaagtgg gggctgagcc catgagcagg agctcaagga gctgcaggtc
2221 tgaggccaga cctgtttaat tctatcccac agagtcgctg cccaacgtgg tggtgaatgg
2281 tgtgctccag ggcctctaca gcttcagcat cagcccagat aaagcccagc caaaggcggc
2341 ctgccaccct gctcctctgc caccgatgcc ctgatcagtc cagaggcctt tggctgcctc
2401 ctaagaaagt catgtgcctc tgtcctatga actccatata aggctgggtc ctcctttggc
2461 ctggacccag gacttaatta cccagtgccc agttgtgcca cattcccact caaggctcag
2521 aacttggctc gcattggtag ctggaggtgg tagaatttgt atgctcttag agcccaacag
2581 ccaaggcagg gtcaagaaga taagtaataa aagaggaagt cagccgggcg cggtggctga
2641 tgcctgtaat cccggcactt tgggaggccg agatgggtgg atcgcctgag gtcaggagtt
2701 cgagaccagc ctgaccaccg tggagaaacc ccgtctctgc tgaaaatgca aaattagccg
2761 ggcattgtgg tggtgcatgc ctgtagtctc agcctctcga gtggctggga ttgcaggcat
2821 ccgccaccat gcccggctga tttttgtatt tttggtggag acgggtttca ccacgttggc
2881 caggctggtc ttgtactcct gacgtcgggt gatccacccg cctcggcttc ccaaagtgct
2941 gggattacgg gcgtgagcca ccgtgctcgg cccaaggcag gagaatctct tgaagccagg
3001 aggcggaagt tgtggtgagc cgagatcgcg ccactgcact ccagcctggg caacaagagt
3061 gaaactccgt ctcaaaataa ataaataata aaggaagaag tcagctgggt gcagaggctc
3121 atgcctgtaa tcccaatact ttaggaggcc aaggcaggag gatgcttggg tctggaagtt
3181 tgagaccagc cagcgcaaca tagtgagacc tgtctctacc aaaaaaaaaa aaaaaa
//