LOCUS BC036522 2596 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens cation channel, sperm associated 1, mRNA (cDNA clone
MGC:33368 IMAGE:5268567), complete cds.
ACCESSION BC036522
VERSION BC036522.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2596)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2596)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC036522.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: n Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 26051219.
FEATURES Location/Qualifiers
source 1..2596
/db_xref="H-InvDB:HIT000051727"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33368 IMAGE:5268567"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2596
/gene="CATSPER1"
/gene_synonym="CATSPER"
/gene_synonym="MGC33335"
/gene_synonym="MGC33368"
/db_xref="GeneID:117144"
/db_xref="HGNC:HGNC:17116"
/db_xref="MIM:606389"
CDS 101..2443
/gene="CATSPER1"
/gene_synonym="CATSPER"
/gene_synonym="MGC33335"
/gene_synonym="MGC33368"
/codon_start=1
/product="cation channel, sperm associated 1"
/protein_id="AAH36522.1"
/db_xref="GeneID:117144"
/db_xref="HGNC:HGNC:17116"
/db_xref="MIM:606389"
/translation="MDQNSVPEKAQNEADTNNADRFFRSHSSPPHHRPGHSRALHHYE
LHHHGVPHQRGESHHPPEFQDFHDQALSSHVHQSHHHSEARNHGRAHGPTGFGLAPSQ
GAVPSHRSYGEDYHDELQRDGRRHHDGSQYGGFHQQSDSHYHRGSHHGRPQYLGENLS
HYSSGVPHHGEASHHGGSYLPHGPNPYSESFHHSEASHLSGLQHDESQHHQVPHRGWP
HHHQVHHHGRSRHHEAHQHGKSPHHGETISPHSSVGSYQRGISDYHSEYHQGDHHPSE
YHHGDHPHHTQHHYHQTHRHRDYHQHQDHHGAYHSSYLHGDYVQSTSQLSIPHTSRSL
IHDAPGPAASRTGVFPYHVAHPRGSAHSMTRSSSTIRSRVTQMSKKVHTQDISTKHSE
DWGKEEGQFQKRKTGRLQRTRKKGHSTNLFQWLWEKLTFLIQGFREMIRNLTQSLAFE
TFIFFVVCLNTVMLVAQTFAEVEIRGEWYFMALDSIFFCIYVVEALLKIIALGLSYFF
DFWNNLDFFIMAMAVLDFLLMQTHSFAIYHQSLFRILKVFKSLRALRAIRVLRRLSFL
TSVQEVTGTLGQSLPSIAAILILMFTCLFLFSAVLRALFRKSDPKRFQNIFTTIFTLF
TLLTLDDWSLIYMDSRAQGAWYIIPILIIYIIIQYFIFLNLVITVLVDSFQTALFKGL
EKAKQERAARIQEKLLEDSLTELRAAEPKEVASEGTMLKRLIEKKFGTMTEKQQELLF
HYLQLVASVEQEQQKFRSQAAVIDEIVDTTFEAGEEDFRN"
BASE COUNT 607 a 862 c 604 g 523 t
ORIGIN
1 agtctgcatt gagcttggct caggaaagaa gggaaatcca ggcggggcct gttgggccca
61 ggtcttgagc tcttttggct ccagagttcc cagcacagtc atggatcaaa actcagtgcc
121 tgaaaaggct cagaatgagg cagacaccaa taacgcagat aggttctttc gctctcactc
181 atcaccccca caccacaggc caggccacag cagagctctc caccattacg agttgcacca
241 tcacggcgtg ccccaccaac gtggtgaatc tcaccaccct ccggagttcc aagacttcca
301 cgaccaagcc ttgtcctccc atgtccacca atctcaccac cacagcgagg cacggaatca
361 cggcagagcc catggcccca caggctttgg tctggctccc tctcaaggcg ccgtcccctc
421 ccaccgttca tacggtgagg actaccatga tgagctccaa cgtgatggca ggaggcatca
481 tgatgggtcc caatacggtg ggttccatca gcagagtgac tcccattacc atagggggtc
541 tcaccatggc agaccccaat atctcggtga gaatttatcc cactattcct ctggcgtgcc
601 ccaccacggt gaggcttccc accatggtgg gtcctacctc ccccatggac ccaatcccta
661 cagtgagtcc ttccaccaca gcgaggcttc ccaccttagc gggctccaac acgatgagtc
721 ccagcatcac caagtccccc accgtggctg gccccaccat caccaagtcc accaccatgg
781 caggtcccgt catcatgaag cccaccagca tggaaagtct cctcatcacg gagagaccat
841 ttcccctcat tcctctgtgg ggtcctacca gcgtgggata tctgactatc acagcgagta
901 ccaccaaggt gatcaccacc ccagtgagta ccaccatggc gaccatcccc accacacaca
961 gcaccactac caccagaccc accggcaccg agactaccat cagcaccaag accaccacgg
1021 cgcgtatcat tccagttacc tccatggcga ctacgtccag agcacttccc aactctctat
1081 cccacacaca tcccggagcc tgattcacga tgcccccggc cctgctgctt ctcgtacagg
1141 agtcttcccc tatcacgtag cacacccacg gggctcggct cacagcatga ctcggtcctc
1201 cagcacaatc cgctcacgtg tcacccagat gtccaaaaaa gtccataccc aggatatctc
1261 caccaaacat tcagaagact ggggcaaaga agaagggcaa tttcagaaac gcaaaaccgg
1321 caggctccag cggacccgca agaagggaca ctctaccaat ctcttccagt ggctgtggga
1381 aaagctaacc ttcctcattc agggcttccg ggaaatgatc cggaacctga cccaatcctt
1441 ggcctttgaa actttcatct tcttcgttgt ctgcctcaac accgtcatgc tggtggccca
1501 gaccttcgct gaagtcgaga tccggggcga gtggtacttc atggccttgg actccatatt
1561 cttctgcatc tacgtggtgg aagccctgct caagatcatc gccctgggcc tctcgtactt
1621 ctttgacttc tggaacaatt tggacttctt cattatggcc atggccgtgc tggacttctt
1681 gctgatgcag acccactcct tcgccatcta ccaccaaagc ctcttccgga tcctcaaggt
1741 cttcaagagc ctgcgggccc tgagggcaat ccgggtcctg cggaggctca gcttcctgac
1801 cagcgtccag gaagtgacag ggaccctggg ccagtccttg ccgtccatcg cagccatcct
1861 catcctcatg tttacctgcc tcttcctctt ctccgcggtc ctccgggcac tgttccgcaa
1921 atctgacccc aagcgcttcc agaacatctt caccaccatc ttcaccctct tcaccttgct
1981 cacgctggat gactggtccc tcatctacat ggacagccgt gcccagggcg cctggtacat
2041 cattcccatc ctcataattt acatcatcat ccagtacttc atcttcctca acctggtgat
2101 tactgtcctg gtggatagct tccagacggc gctgttcaaa ggccttgaga aagcgaagca
2161 ggagagggcc gcccggatcc aagagaagct gctggaagac tcactgacgg agctcagagc
2221 tgcagagccc aaagaggtgg cgagtgaagg caccatgctg aagcggctca tcgagaaaaa
2281 gtttgggacc atgactgaga agcagcagga gctcctgttc cattacctgc agctggtggc
2341 aagcgtggag caggagcagc agaagttccg ctcccaggca gccgtcatcg atgagattgt
2401 ggacaccaca tttgaggctg gagaagagga cttcaggaat tgaccccagg aggacaccag
2461 atacagactt cagcccctgg cagtctgccc acctgggtgc actgggacgg gtccccagat
2521 ctgctggaat gattgtccgg gccctgcaga gcaggggccc caacagagtt tttaaacccc
2581 aaaaaaaaaa aaaaaa
//