LOCUS BC036516 3565 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens family with sequence similarity 46, member C, mRNA
(cDNA clone MGC:33007 IMAGE:5267660), complete cds.
ACCESSION BC036516
VERSION BC036516.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3565)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3565)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC036516.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: l Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38570094.
FEATURES Location/Qualifiers
source 1..3565
/db_xref="H-InvDB:HIT000051724"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33007 IMAGE:5267660"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3565
/gene="FAM46C"
/db_xref="GeneID:54855"
/db_xref="HGNC:HGNC:24712"
CDS 129..1304
/gene="FAM46C"
/codon_start=1
/product="family with sequence similarity 46, member C"
/protein_id="AAH36516.3"
/db_xref="GeneID:54855"
/db_xref="HGNC:HGNC:24712"
/translation="MAEESSCTRDCMSFSVLNWDQVSRLHEVLTEVVPIHGRGNFPTL
EITLKDIVQTVRSRLEEAGIKVHDVRLNGSAAGHVLVKDNGLGCKDLDLIFHVALPTE
AEFQLVRDVVLCSLLNFLPEGVNKLKISPVTLKEAYVQKLVKVCTDTDRWSLISLSNK
NGKNVELKFVDSIRRQFEFSVDSFQIILDSLLFFYDCSNNPISEHFHPTVIGESMYGD
FEEAFDHLQNRLIATKNPEEIRGGGLLKYSNLLVRDFRPTDQEEIKTLERYMCSRFFI
DFPDILEQQRKLETYLQNHFAEEERSKYDYLMILRRVVNESTVCLMGHERRQTLNLIS
LLALRVLAEQNIIPSATNVTCYYQPAPYVSDGNFSNYYVAHPPVTYSQPYPTWLPCN"
BASE COUNT 921 a 770 c 841 g 1033 t
ORIGIN
1 actcggtgcc gctgcctagg ggctgtagag gtcgcgccgc tcctgctggg gcctgcccac
61 gccaaggacc tgcctctgtc gcctcctctt ctattgccca gtttccccag ccagaacatc
121 ccctgaagat ggcagaggag agcagctgta ccagggattg catgtccttc agcgtgctca
181 actgggatca ggttagccgg ctgcatgagg tcctcactga agttgtacct atccacggac
241 gaggcaactt tccaaccttg gagataactc tgaaggacat cgtccagacc gtccgcagtc
301 ggctggagga ggcaggcatc aaagtgcatg acgtccggct gaatggctcc gcagctggcc
361 acgttttggt caaagacaat ggcttgggct gcaaagacct ggacctaatc ttccatgtgg
421 ctcttccaac agaggcagaa tttcagctgg ttagagatgt ggttctgtgt tcccttctga
481 acttcctgcc agagggtgtg aacaagctca aaatcagtcc agtcactctg aaggaggcat
541 atgtgcagaa gctagtgaag gtttgcacgg acactgaccg ctggagcctg atctccctct
601 ccaacaagaa cgggaagaac gtggagctga agtttgtcga ctccattcgg cgtcagtttg
661 agttcagtgt ggactctttc caaatcatcc tggattcttt gcttttcttc tatgactgtt
721 ccaataatcc catctctgag cacttccacc ccaccgtgat tggggagagc atgtacgggg
781 actttgagga agcttttgac catctgcaga acagactgat cgccaccaag aacccagaag
841 aaatcagagg cgggggactt ctcaagtaca gcaaccttct tgtgcgggac ttcaggccca
901 cagaccagga agaaatcaaa actctagagc gctacatgtg ctccaggttc ttcatcgact
961 tcccggacat ccttgaacag cagaggaagt tggagactta ccttcaaaac cacttcgctg
1021 aagaagagag aagcaagtac gactacctca tgatccttcg cagggtggtg aacgagagca
1081 ccgtgtgtct catggggcat gaacgcaggc agactctgaa cctcatctcc ctcctggcct
1141 tgcgtgtgct ggcggaacaa aacatcatcc ccagtgccac caacgtcacc tgttactacc
1201 agccggcccc ttacgtcagt gatggcaact tcagcaacta ctacgttgcc catcctccag
1261 tcacctacag ccagccttac cctacctggc tgccctgtaa ctaaccttga gacctgaggg
1321 tttccacagt gggaacccca atagggctag ggctctcagg taggggagcc tccttctaga
1381 tgtaggcatt tggcttttaa aggggaactc agctctgatt ctgctttttt tttttttttt
1441 ttcctttgtg tacccattgg aatgggtcta cagtgtatca tgagccaacc ctcaaaggac
1501 ccgtattaca gtgccatgtt ggaaaacgct acaggaagca tgacctatcc acatctttcc
1561 aagatagaca ctaacatgtc atgtcccaaa cattagcacg tgggggttga gctctgtgca
1621 gtaatcgaga ttgggagaat ttgggcagcg cgtgagaagt gctaagctac ttgttttctc
1681 acttgagccc gggtaggctg tgttggccct cacttgggat tctcagcagt tacatgaaag
1741 ttgtgccgat aatctcttct cttgtaccaa ttttagtcag gcagaaaatg gtaaacatga
1801 gggtgctctt gtgacttaat ttttgttcaa gggactaagt tgcttatgtt tattccctgt
1861 cagcggagtg gagaatgtca ttcatcaata aaccaaagcc aatagctgga gaattgagat
1921 ctggttgaaa gtggtttatg gtttacatgc tgtactatcc tgaggaattg cgagatattg
1981 ctgaggggaa aaaaaaatga ccttttcttg aaatgtaact tgaaaacaaa ataaaatgtg
2041 gaacataatg tttaattaga attgtggtgg tggtagtgga aggggataat tgtaaatagg
2101 aaacatgaat gttcattttt ttctttaaag aattcttatt aaatggctcc ctgccttttt
2161 tttctttttt cctcatcagc tctttcatgg ctgaattttg ttttattctt cctaagactg
2221 aggattgtgc tgagtccaga gtcattgtgg taactgacat gagggtcttc ccatgtttta
2281 actggaaacc cactttggtc acattccaag tatgacacag ctgttcttct ggagtacttt
2341 agctattttt tgtttttgtt cttttcgttt tttttttttc caaaaatagt gacttccttc
2401 tccaggtgtg tttgacagca actcaattca ggaatttcgg tagaactgag tgacctgtgg
2461 aactgcttta gaatctaacc tgctgtcttc gtgctctgtg tgaaggggaa gctggggggt
2521 tagcatgaag tctggccttg tgtgcattgg agcttccaag gcactttgaa atcattccag
2581 tatatttggg aagaattgag tgaatgagaa tgctcttcct tattctggta gatttgactt
2641 gtttataatt ctgcacttta gaagaaaaac agtgttaatc tgtagttgaa agaaagctta
2701 gtagatgaga gagttctagg ctactgtggc tttttccagt agatttagat gagattatgt
2761 gttttgaaat gttttgtggg atcccttagg aagcatcact tcagggcaga gacactcaat
2821 attgccagcc agcttgggtt ctaaagtgat ttaatcaaat tcatgctcct gatttttttt
2881 ttcccccttc ctttggctat gaaaacccaa agcccggagt gattgttttc tccttgcttt
2941 aagcagtgaa gttatcctaa tgcaaaagag cttagtagaa aatgagtggt ttaccttttt
3001 ttctaaaagt atattttcaa gtttattctg gaatgtgatg tcttggtcct cttaaaagca
3061 gatcagccat gactgaaact caaggcttag ctggtatcta tgttgtgcta cattaggtga
3121 ctagaagcca cttcttagtg taatcagctc ctgtttccct gtgagcctta gttatatttt
3181 aattcagtgg ctttgagtca aggccggttc taattgaggg gacccagtgt gcttcagtgt
3241 taagagtggg gcaatgaaga gtgaacccca atgaagagtg atcccaactt tggaaactat
3301 ctggtcattc atgaccttaa aaagctgcca tggtggtcaa atggcatgtg tttgcacaaa
3361 aatgaccgat gtgtttaacc aaagctttga aatgtgatga agccaccaac ataagcactt
3421 gcctaacaga aatcagtatt tcttcctact tagaaggctt ggggcccagg gtaatgaggc
3481 accagatgaa gataagatct gcatcaagga attaaatttc cagtttgtcc ttggaaaaaa
3541 aaaaaaaaga aaaaaaaaaa aaaaa
//