LOCUS BC036499 2244 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens COP9 constitutive photomorphogenic homolog subunit 8
(Arabidopsis), mRNA (cDNA clone MGC:43256 IMAGE:5264527), complete
cds.
ACCESSION BC036499
VERSION BC036499.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2244)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2244)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: j Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40805828.
FEATURES Location/Qualifiers
source 1..2244
/db_xref="H-InvDB:HIT000094446"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43256 IMAGE:5264527"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2244
/gene="COPS8"
/gene_synonym="COP9"
/gene_synonym="CSN8"
/gene_synonym="MGC1297"
/gene_synonym="SGN8"
/db_xref="GeneID:10920"
/db_xref="HGNC:HGNC:24335"
CDS 659..1288
/gene="COPS8"
/gene_synonym="COP9"
/gene_synonym="CSN8"
/gene_synonym="MGC1297"
/gene_synonym="SGN8"
/codon_start=1
/product="COP9 constitutive photomorphogenic homolog
subunit 8 (Arabidopsis)"
/protein_id="AAH36499.1"
/db_xref="GeneID:10920"
/db_xref="HGNC:HGNC:24335"
/translation="MPVAVMAESAFSFKKLLDQCENQELEAPGGIATPPVYGQLLALY
LLHNDMNNARYLWKRIPPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETV
QPIMEALRDATRRRAFALVSQAYTSIIADDFAAFVGLPVEEAVKGILEQGWQADSTTR
MVLPRKPVAGALDVSFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN"
BASE COUNT 589 a 501 c 540 g 614 t
ORIGIN
1 agcggattcc ctctggctgc ggttccgaga atagcctgga aggaggcagg ggtcccggct
61 ggagaagcgt ggctccgggg tggggcgtgc agggctagcc cgggcggggg acgctgccca
121 acaagcaggt ttgcggagac tcacacctta gattctgagt ttttaagctt gtttcctcag
181 agcagggaac tcacgaacgt ttcgtgagca cctacggtat gcagggtacg gtgcggagcc
241 ctagcgtcac tgacgaccgg gacagccgag cagctgcagg atccgtcgtg ttccccagca
301 attttaatat ttaaaaattc gttactgttg ctgttacttg ttttctatgt attggatgtc
361 ttcgtgaaga accctcaaaa gtgcaacgaa ctcctccctg ccagagggcg gccgcgcgct
421 ctgagtacag cttcccgcgg agccggccag gtcctccagg gcaccgagaa agccggccag
481 aacggcggcg ccctatcccg gccgcagcga tgtctgacgg cgccccggaa ctgacggtct
541 ggtacgcagg ggcgctcggc ggcaacggcg gctttaaacg tcatcgcggg cgcgacgcct
601 gagggacagt ctggggtttg gctgtccgga cggtgcagcg gcgaggccgg ccgcgaagat
661 gccagtggcg gtgatggcgg aaagcgcctt tagtttcaaa aagttgctgg atcagtgcga
721 gaaccaggag ctcgaggccc ctggaggaat tgctacaccc ccagtgtatg gtcagcttct
781 agctttatat ttgctccata atgacatgaa taatgcaaga tatctttgga aaagaatacc
841 acctgctata aaatctgcaa attctgaact tgggggaatt tggtcagtag gacaaagaat
901 ctggcagaga gatttccctg ggatctatac aaccatcaac gctcaccagt ggtctgagac
961 ggtccagcca attatggaag cacttagaga tgcaacaagg agacgcgcct ttgccctggt
1021 ctctcaagcg tatacttcaa tcatcgccga tgattttgca gcctttgttg gacttcctgt
1081 agaagaggct gtgaaaggca tattagaaca aggatggcaa gctgattcca ccacaagaat
1141 ggttctgccc agaaagccag ttgcaggggc cctggatgtt tcctttaaca agtttattcc
1201 cttatcagag cctgctccag ttcccccaat acccaatgaa cagcagttag ccagactgac
1261 ggattatgtg gctttccttg aaaactgatt tatcactctg agttcaagat tcatcttcag
1321 aatcctgtat actgacaaac gtagaaatgt aaagtttgta ttttcaattt attggatggc
1381 ttaagcacct cagcattcct tactatgtga taaaatacat atagaatata agatatacta
1441 tatacatttt gtccataaac gttatgctga atagttgttg aaacagttct cattttgtag
1501 tatttaataa tctggatgga gcctgtcagt attacagtta gttttctagt gactcataaa
1561 ataagatttc ctgtttcatg tagaatagtg tttgtcaact gtcttttctc tgtcccagca
1621 catgccgtac tcttatatgt accattggtt gataattata atgattcatt tggacttgaa
1681 gaaagattgt ccccaggcac agtatctgaa tcactgggga ttatgattca ccctctttgg
1741 agaacatgct ctcttttcac cccccacctc ctgagagcca ctaatgtaag atacagaaac
1801 atagctgagg aacaaataga ccatttccat actaaaccag tttgttaact ttagattttt
1861 tccaatagtg tgagtatatc cattgctggc agtggagggc ttgccatgaa aatgcaactt
1921 atttaagaca tttatgagac atattaactt gtgctgtcgc cttttagaag gagaaactta
1981 agtgtggaat gcattatatg ggcaaagaag ctatgaagat acatgataca ctttgtacaa
2041 ctatcctgca gcccattggt tgcttatatt tatcgcttgg ctcaagttct gccctttgga
2101 gaaatactga gcaagtcttt cattctctgt gtgacagccc tctgaatatt tgaagttgtt
2161 tgttgtaact taaggttata acagccctta gttcatttac tctgcatttg ttcaataaat
2221 atttaaccga aaaaaaaaaa aaaa
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