LOCUS BC036472 3017 bp mRNA linear HUM 22-AUG-2008
DEFINITION Homo sapiens protein kinase C, beta, mRNA (cDNA clone MGC:41878
IMAGE:5260547), complete cds.
ACCESSION BC036472
VERSION BC036472.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3017)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3017)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47157320.
FEATURES Location/Qualifiers
source 1..3017
/db_xref="H-InvDB:HIT000051718"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41878 IMAGE:5260547"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3017
/gene="PRKCB"
/gene_synonym="PKC-beta"
/db_xref="GeneID:5579"
/db_xref="HGNC:HGNC:9395"
/db_xref="MIM:176970"
CDS 158..2179
/gene="PRKCB"
/gene_synonym="PKC-beta"
/codon_start=1
/product="protein kinase C, beta"
/protein_id="AAH36472.1"
/db_xref="GeneID:5579"
/db_xref="HGNC:HGNC:9395"
/db_xref="MIM:176970"
/translation="MADPAAGPPPSEGEESTVRFARKGALRQKNVHEVKNHKFTARFF
KQPTFCSHCTDFIWGFGKQGFQCQVCCFVVHKRCHEFVTFSCPGADKGPASDDPRSKH
KFKIHTYSSPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNVPSLCGTDHTERRG
RIYIQAHIDRDVLIVLVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCS
LNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKASVDGWFK
LLSQEEGEYFNVPVPPEGSEANEELRQKFERAKISQGTKVPEEKTTNTVSKFDNNGNR
DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR
VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI
AIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYI
APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSK
EAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGR
NAENFDRFFTRHPPVLTPPDQEVIRNIDQSEFEGFSFVNSEFLKPEVKS"
BASE COUNT 783 a 765 c 749 g 720 t
ORIGIN
1 agcgggcgcg ccgcggccgc cagagccggc gcaggggaag cgcccgcggc cccgggtgca
61 gcagcggccg ccgcctcccg cgcctccccg gcccgcagcc cgcggtcccg cggccccggg
121 gccggcacct ctcgggctcc ggctccccgc gcgcaagatg gctgacccgg ctgcggggcc
181 gccgccgagc gagggcgagg agagcaccgt gcgcttcgcc cgcaaaggcg ccctccggca
241 gaagaacgtg catgaggtca agaaccacaa attcaccgcc cgcttcttca agcagcccac
301 cttctgcagc cactgcaccg acttcatctg gggcttcggg aagcagggat tccagtgcca
361 agtttgctgc tttgtggtgc acaagcggtg ccatgaattt gtcacattct cctgccctgg
421 cgctgacaag ggtccagcct ccgatgaccc ccgcagcaaa cacaagttta agatccacac
481 gtactccagc cccacgtttt gtgaccactg tgggtcactg ctgtatggac tcatccacca
541 ggggatgaaa tgtgacacct gcatgatgaa tgtgcacaag cgctgcgtga tgaatgttcc
601 cagcctgtgt ggcacggacc acacggagcg ccgcggccgc atctacatcc aggcccacat
661 cgacagggac gtcctcattg tcctcgtaag agatgctaaa aaccttgtac ctatggaccc
721 caatggcctg tcagatccct acgtaaaact gaaactgatt cccgatccca aaagtgagag
781 caaacagaag accaaaacca tcaaatgctc cctcaaccct gagtggaatg agacatttag
841 atttcagctg aaagaatcgg acaaagacag aagactgtca gtagagattt gggattggga
901 tttgaccagc aggaatgact tcatgggatc tttgtccttt gggatttctg aacttcagaa
961 agccagtgtt gatggctggt ttaagttact gagccaggag gaaggcgagt acttcaatgt
1021 gcctgtgcca ccagaaggaa gtgaggccaa tgaagaactg cggcagaaat ttgagagggc
1081 caagatcagt cagggaacca aggtcccgga agaaaagacg accaacactg tctccaaatt
1141 tgacaacaat ggcaacagag accggatgaa actgaccgat tttaacttcc taatggtgct
1201 ggggaaaggc agctttggca aggtcatgct ttcagaacga aaaggcacag atgagctcta
1261 tgctgtgaag atcctgaaga aggacgttgt gatccaagat gatgacgtgg agtgcactat
1321 ggtggagaag cgggtgttgg ccctgcctgg gaagccgccc ttcctgaccc agctccactc
1381 ctgcttccag accatggacc gcctgtactt tgtgatggag tacgtgaatg ggggcgacct
1441 catgtatcac atccagcaag tcggccggtt caaggagccc catgctgtat tttacgctgc
1501 agaaattgcc atcggtctgt tcttcttaca gagtaagggc atcatttacc gtgacctaaa
1561 acttgacaac gtgatgctcg attctgaggg acacatcaag attgccgatt ttggcatgtg
1621 taaggaaaac atctgggatg gggtgacaac caagacattc tgtggcactc cagactacat
1681 cgcccccgag ataattgctt atcagcccta tgggaagtcc gtggattggt gggcatttgg
1741 agtcctgctg tatgaaatgt tggctgggca ggcacccttt gaaggggagg atgaagatga
1801 actcttccaa tccatcatgg aacacaacgt agcctatccc aagtctatgt ccaaggaagc
1861 tgtggccatc tgcaaagggc tgatgaccaa acacccaggc aaacgtctgg gttgtggacc
1921 tgaaggcgaa cgtgatatca aagagcatgc atttttccgg tatattgatt gggagaaact
1981 tgaacgcaaa gagatccagc ccccttataa gccaaaagct tgtgggcgaa atgctgaaaa
2041 cttcgaccga tttttcaccc gccatccacc agtcctaaca cctcccgacc aggaagtcat
2101 caggaatatt gaccaatcag aattcgaagg attttccttt gttaactctg aatttttaaa
2161 acccgaagtc aagagctaag tagatgtgta gatctcagtc cttcatttct gtcattcaag
2221 ctcaacggct attgtggtga catttttatg tttttcattg ccaagttgca tccatgtttg
2281 attttctgat gagactagag tgacagtgtt tcagaaccca aatgtcctca ggtagtttgg
2341 agcatctcta tgagatggga ttatgcagat ggcctatgga aaatgcagct gcataattaa
2401 cacattatca aagtcctctt acaatttatt ttccgcagca tgtcagctaa gtagacccaa
2461 tggggagaga aaatgcctgc tttctttccc tctttttctg cactgccata ttcaccccca
2521 accatccaat ctgtggataa ttggatgtta gcggtactct tccacttccg ggcctggagc
2581 ttggcttgta tccaagtgta tggttgcttt gcttaagagg aatccctcta tttcacctgt
2641 tctggaggca ccagaccttg aaaagaacat gctcaaaata aaatgttatc tgttattttt
2701 gtaaactcaa agttaagatg atcaaagttc taaaattcca agaatgtgct tttagacggt
2761 ctcaatctaa aagcacttca aggggtcaaa gggcaaccag cttgggtgct acctcagtgt
2821 tgtagtttct gatactttat gtctttgctc accctcatcc ccaaactact tgaaaagggc
2881 atttggcacc actctctgaa acaacacagt cactctagca aggcccccaa agggccctgg
2941 ttttacatta catttcaaac tttatttgct ttggggtttt gtttctgttg ttgttcaaat
3001 gcaaaaaaaa aaaaaaa
//