LOCUS BC036459 2344 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens RING1 and YY1 binding protein, mRNA (cDNA clone
MGC:33492 IMAGE:4813939), complete cds.
ACCESSION BC036459
VERSION BC036459.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2344)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2344)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: e Column: 4.
FEATURES Location/Qualifiers
source 1..2344
/db_xref="H-InvDB:HIT000051709"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33492 IMAGE:4813939"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2344
/gene="RYBP"
/gene_synonym="AAP1"
/gene_synonym="DEDAF"
/gene_synonym="YEAF1"
/db_xref="GeneID:23429"
/db_xref="HGNC:HGNC:10480"
/db_xref="MIM:607535"
CDS 189..875
/gene="RYBP"
/gene_synonym="AAP1"
/gene_synonym="DEDAF"
/gene_synonym="YEAF1"
/codon_start=1
/product="RING1 and YY1 binding protein"
/protein_id="AAH36459.1"
/db_xref="GeneID:23429"
/db_xref="HGNC:HGNC:10480"
/db_xref="MIM:607535"
/translation="MTMGDKKSPTRPKRQAKPATDEGFWDCSVCTFRNSAEAFKCSIC
DVRKGTSTRKPRINSQLVAQQVAQQYATPPPPKKEKKEKVEKQDKEKPEKDKEISPSV
TKKNTNKKTKPKSDILKDPPSEANSIQSANATTKTSETNHTSRPRLKNVDRSTAQQLA
VTVGNVTVIITDFKEKTRSSSTSSSTVTSSAGSEQQNQSSSGSESTDKGSSRSSTPKG
DMSAVNDESF"
BASE COUNT 678 a 522 c 511 g 633 t
ORIGIN
1 agcggagtct cgtccggaga ctggcagcgg cggcggcggc ggcggccgga gctcgagccc
61 cagcggctga gggcgggcgg gcgggcgcgg gggagggagg ggggccggtc cgcgacgact
121 ccccggacgg cgtttctcct ccgagcggcg ccggtttcgg cttggggggg gcggggtaca
181 gcccatccat gaccatgggc gacaagaaga gcccgaccag gccaaaaaga caagcgaaac
241 ctgccacaga cgaagggttt tgggattgta gcgtctgcac cttcagaaac agtgctgaag
301 cctttaaatg cagcatctgc gatgtgagga aaggcacctc caccagaaaa cctcggatca
361 attctcagct ggtggcacaa caagtggcac aacagtatgc caccccacca ccccctaaaa
421 aggagaagaa ggagaaagtt gaaaagcagg acaaagagaa acctgagaaa gacaaggaaa
481 ttagtcctag tgttaccaag aaaaatacca acaagaaaac caaaccaaag tctgacattc
541 tgaaagatcc tcctagtgaa gcaaacagca tacagtctgc aaatgctaca acaaagacca
601 gcgaaacaaa tcacacctca aggccccggc tgaaaaacgt ggacaggagc actgcacagc
661 agttggcagt aactgtgggc aacgtcaccg tcattatcac agactttaag gaaaagactc
721 gctcctcatc gacatcctca tccacagtga cctccagtgc agggtcagaa cagcagaacc
781 agagcagctc ggggtcagag agcacagaca agggctcctc ccgttcctcc acgccaaagg
841 gcgacatgtc agcagtcaat gatgaatctt tctgaaattg cacatggaat tgtgaaaact
901 atgaatcagg gtatgaaatt caaaacctcc acctgcccat gctgcttgca tccctggaga
961 atcttctgtg gacatcgacc tcttagtgat gctgccagga taatttctgc ttgccatggg
1021 catctggcca ccaaggaatt tcgcaccctg acgattactc ttgacacttt tatgtattcc
1081 attgttttat atgattttcc taacaatcat ttataattgg atgtgctcct gaatctactt
1141 tttataaaaa aaaaaaaaaa atctgctgtg cacaattttc catgtacatt acaactggtt
1201 ttttgttttt gttttgttgc cggtggggag ggctgggagg gggagggaac ttttatttat
1261 tgtgttcaca aactccatcc tttcagcata tccttttaag tttagttctt tcttccagtt
1321 atactatgta ctatcagttt tgatataact atatatatat aaatataaaa ttatatataa
1381 agggttattt gaaaccaatc catggcaacg ctggtgcttg atacactgtg aagtgaatac
1441 aacattgaac agttacagat ctgggacagt cccttctatg aaagtgctga aatttaatta
1501 aaatcagtct tacatgaagt atgttccaat ccatgtggga acttgactct ctcatctgtc
1561 taaagagtac tggacgatat aaaaatatat attttttaaa caatgtgatc tcaaatttaa
1621 agactgctcc agatagcctg catttgcaat ggaataactg acaaatcaca agtggtttag
1681 ttgggcaggg ctttgatcat tcaaaagtaa ctaaagtagc tccagaatgc caagtattcg
1741 tgtaaattac ggttacatgt tatcatttgc tgttcttaca taagcactca tgaaaatatg
1801 gtattctgta acttgaattc catccatttt ccagacgtct actcatgtct gaggtaaatc
1861 tagaaattgt cttagtttta ggattgaaac agtctataaa ctgtattttt ggtccatcca
1921 ggaagctagt cccttgtttc tcctttctac atgacattgc agtggtggtt tctgtaatta
1981 aaatttgttt gcctcatgtc cctttgtctg ataaaccttc actctaccga ttcagttgtg
2041 agcattcttt ttttccttct caaaacctac tatgatttgt tttactgaac aaaggttatc
2101 aaccacacat ccagtcctga catggagctt ttcagtgttt ggagacattt ctcaatcccc
2161 tgctgtggta ggaactccag tggtgaacgg cttgcgcgcc tgcagccaga gttgcaggga
2221 aagctcgtac ttactgcgag cagcatgtaa tcttttttct tcctggacat aaagatagct
2281 tgagtaaact gttctatttc attctcttca ctctttttac tgtcttgcaa aaaaaaaaaa
2341 aaaa
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