LOCUS BC036450 2196 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens SAM domain and HD domain 1, mRNA (cDNA clone MGC:33043 IMAGE:4816438), complete cds. ACCESSION BC036450 VERSION BC036450.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2196) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2196) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-AUG-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC036450.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 46 Row: f Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38016913. FEATURES Location/Qualifiers source 1..2196 /db_xref="H-InvDB:HIT000051702" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33043 IMAGE:4816438" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2196 /gene="SAMHD1" /gene_synonym="DCIP" /gene_synonym="HDDC1" /gene_synonym="MOP-5" /gene_synonym="SBBI88" /db_xref="GeneID:25939" /db_xref="HGNC:HGNC:15925" /db_xref="MIM:606754" CDS 29..1909 /gene="SAMHD1" /gene_synonym="DCIP" /gene_synonym="HDDC1" /gene_synonym="MOP-5" /gene_synonym="SBBI88" /codon_start=1 /product="SAM domain and HD domain 1" /protein_id="AAH36450.1" /db_xref="GeneID:25939" /db_xref="HGNC:HGNC:15925" /db_xref="MIM:606754" /translation="MQRADSEQPSKRPRCDDSPRTPSNTPSAEADWSPGLELHPDYKT WGPEQVCSFLRRGGFEEPVLLKNIRENEITGALLPCLDESRFENLGVSSLGERKKLLS YIQRLVQIHVDTMKVINDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGA SHNRFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFD GRFIPLARPEVKWTHEQGSVMMFEHLINSNGIKPVMEQYGLIPEEDICFIKEQIVGPL ESPVEDSLWPYKGRPENKSFLYEIVSNKRNGIDVDKWDYFARDCHHLGIQNNFDYKRF IKFARVCEVDNELRICARDKEVGNLYDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLK ADDYIEITGAGEKKYRISTAIDDMEAYTKLTDNIFLEILYSTDPKLKDAREILKQIEY RNLFKYVGETQPTGQIKIKREDYESLPKEVASAKPKVLLDVKLKAEDFIVDVINMDYG MQEKNPIDHVSFYCKTAPNRAIRITKNQVSQLLPEKFVEQLIRVYCKKVDRKSLYAAR QYFVQWCADRNFTKPQDGDVIAPLITPQKKEWNDSTSVQNPTRLREASKSRVQLFKDD PM" BASE COUNT 704 a 440 c 468 g 584 t ORIGIN 1 actggtgtgc cggacgccag gtgtagccat gcagcgagcc gattccgagc agccctccaa 61 gcgtccccgt tgcgatgaca gcccgagaac cccctcaaac accccttccg cagaggcaga 121 ctggtccccg ggcctggaac tccatcccga ctacaagaca tggggtccgg agcaggtgtg 181 ctccttcctc aggcgcggtg gctttgaaga gccggtgctg ctgaagaaca tccgagaaaa 241 tgaaatcaca ggcgcattac tgccttgtct tgatgagtct cgttttgaaa atcttggagt 301 aagttccttg ggggagagga agaagctgct tagttatatc cagcgattgg ttcaaatcca 361 cgttgataca atgaaggtaa ttaatgatcc tatccatggc cacattgagc tccaccctct 421 cctcgtccga atcattgata cacctcaatt tcaacgtctt cgatacatca aacagctggg 481 aggtggttac tatgtttttc caggagcttc gcacaatcga tttgagcata gtctaggggt 541 ggggtatcta gcaggatgtc tagttcacgc actgggtgaa aaacaaccag agctgcagat 601 aagtgaacga gatgttctct gtgttcagat tgctggactt tgtcatgatc tcggtcatgg 661 gccattttct cacatgtttg atggacgatt tattccactt gctcgcccgg aggtgaaatg 721 gacgcatgaa caaggctcag ttatgatgtt tgagcacctt attaattcta atggaattaa 781 gcctgtcatg gaacaatatg gtctcatccc tgaagaagat atttgcttta taaaggaaca 841 aattgtagga ccacttgaat cacctgtaga agattcattg tggccatata aagggcgtcc 901 tgaaaacaaa agcttccttt atgagatagt atctaataaa agaaatggca ttgatgtgga 961 caaatgggat tattttgcca gggactgcca tcatcttgga atccaaaata attttgatta 1021 caagcgcttt attaagtttg cccgtgtctg tgaagtagac aatgagttgc gtatttgtgc 1081 tagagataag gaagttggaa atctgtatga catgttccac actcgcaact ctttacaccg 1141 tagagcttat caacacaaag ttggcaacat tattgataca atgattacag atgctttcct 1201 caaagcagat gactacatag agattacagg tgctggagaa aaaaagtatc gcatttctac 1261 agcaattgac gacatggaag cctatactaa gctgacagat aacatttttc tggagatttt 1321 atactctact gatcccaaat tgaaagacgc acgagagatt ttaaaacaaa ttgaataccg 1381 taatctattc aagtatgtgg gtgagacgca gccaacagga caaataaaga ttaaaaggga 1441 ggactatgaa tctcttccaa aagaggttgc cagtgctaaa cccaaagtat tgctagacgt 1501 gaaactgaag gctgaagatt ttatagtgga tgttatcaac atggattatg gaatgcaaga 1561 aaagaatcca attgatcatg ttagcttcta ttgtaagact gcccccaaca gagcaatcag 1621 gattactaaa aaccaggttt cacaacttct gccagagaaa tttgtagagc agctgattcg 1681 agtatattgt aagaaggtgg acagaaagag tttgtatgcc gcaagacaat attttgttca 1741 gtggtgtgca gacagaaatt tcaccaagcc gcaggatggc gatgttatag ccccactcat 1801 aacacctcaa aaaaaggaat ggaacgacag tacttcagtc caaaatccaa ctcgcctccg 1861 agaagcatcc aaaagcagag tccagctttt taaagatgac ccaatgtgaa tgtctgtagt 1921 cagttgttta caaactccct ctcctgcaca attcatttag aggcttcaat catagaattc 1981 tgcaaattaa tgacaactca tgctttaatt ttgtattttg aatgtacacg catgctgaag 2041 ctaagtaact tttaatcaaa gaaataagat ggtattaggc aaatcttact atactatgaa 2101 aagcattacc ttgcctattt ttaatattat taaagccttt ctccttcagt aaaaaaaaaa 2161 aaaaaaaaaa aaaaaaaaag aaaaaaaaaa aaaaaa //