LOCUS BC036449 2240 bp mRNA linear HUM 22-AUG-2008
DEFINITION Homo sapiens cytohesin 1 interacting protein, mRNA (cDNA clone
MGC:33019 IMAGE:4830272), complete cds.
ACCESSION BC036449
VERSION BC036449.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2240)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2240)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC036449.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: c Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47933391.
FEATURES Location/Qualifiers
source 1..2240
/db_xref="H-InvDB:HIT000051701"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33019 IMAGE:4830272"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2240
/gene="CYTIP"
/gene_synonym="B3-1"
/gene_synonym="CASP"
/gene_synonym="CYBR"
/gene_synonym="CYTHIP"
/gene_synonym="HE"
/db_xref="GeneID:9595"
/db_xref="HGNC:HGNC:9506"
/db_xref="MIM:604448"
CDS 31..1110
/gene="CYTIP"
/gene_synonym="B3-1"
/gene_synonym="CASP"
/gene_synonym="CYBR"
/gene_synonym="CYTHIP"
/gene_synonym="HE"
/codon_start=1
/product="cytohesin 1 interacting protein"
/protein_id="AAH36449.1"
/db_xref="GeneID:9595"
/db_xref="HGNC:HGNC:9506"
/db_xref="MIM:604448"
/translation="MSLQRLLQHSSNGNLADFCAGPAYSSYSTLTGSLTMDDNRRIQM
LADTVATLPRGRKQLALTRSSSLSDFSWSQRKLVTVEKQDNETFGFEIQSYRPQNQNA
CSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTI
ETLNGTMILKRTELEAKLQVLKQTLKQKWVEYRSLQLQEHRLLHGDAANCPSLENMDL
DELSLFGPLPGPGPALVDRNRLSSESSCKSWLSSMTMDSEDGYQTCVSEDSSRGAFSR
QTSTDDECFIPKEGDDFLRRSSSRRNRSISNTSSGSMSPLWEGNLSSMFGTLPRKSRK
GSVRKQLLKFIPGLHRAVEEEESRF"
BASE COUNT 699 a 423 c 482 g 636 t
ORIGIN
1 atgtgctagc tggagtgatc tttattcaca atgtctttac aaaggctcct gcaacacagc
61 agcaatggca atttggcgga cttctgcgct gggccagcgt atagctctta ctccacactc
121 accggcagcc ttacgatgga cgataataga aggattcaaa tgctagcaga cacggtggct
181 actctgcctc ggggacgaaa gcagcttgct ttgaccagat caagttcttt aagtgacttt
241 tcctggtctc aaagaaagct tgttactgtg gagaagcagg ataatgaaac atttggattt
301 gaaattcagt cttacaggcc ccagaatcag aatgcctgct cctcggaaat gttcactttg
361 atatgcaaaa tacaggagga cagcccagct cactgtgctg gcctgcaagc tggtgatgtc
421 cttgcaaata tcaatggtgt gagcacagaa ggttttacct acaaacaagt cgttgacctg
481 atcagatcgt ccggaaacct gctaacgata gagactctta atggaacaat gattctgaaa
541 agaacggagc ttgaagcaaa gctgcaggtt ttaaagcaaa ctttgaaaca aaaatgggtg
601 gagtacagat ctctgcagtt acaggaacat cgtctgcttc atggtgatgc agctaattgc
661 cccagtttgg aaaacatgga cttggatgaa ttgtctttgt ttggacccct gcctgggcca
721 ggcccagccc ttgtggaccg gaatcgatta tccagtgaga gcagctgtaa gagctggctg
781 agctccatga cgatggacag tgaagatggc taccagacgt gtgtgtctga ggactccagc
841 aggggtgcct tcagtcggca gacgagtaca gatgatgagt gctttatccc caaggagggg
901 gatgattttc tgaggaggtc atcttcaagg aggaaccgga gcatcagtaa caccagcagc
961 ggatccatgt ctcccttgtg ggagggcaac ttatcaagca tgtttgggac cctgccccgg
1021 aagagcagaa agggaagtgt ccgaaagcaa ctcttgaaat ttatccctgg ccttcatcgt
1081 gctgtggaag aggaagaaag tcgcttttga cggattgtgg tgtcctttca aattagctta
1141 tttcacaaat atctctagac tcacccagat cccagcttgg tgggaaagtg cagaagaatt
1201 gcaaaactga catcccattt cacagcaata gtgaccttta tttaaattgt tgtgttatag
1261 tttatgcttc ttaaatcatt tttcaaccta aacagccaat ttctaagcag acaggaaaac
1321 taaataataa gttaattaat ataacaaaga tgcaggttcc tgctcattcc agtaatgtct
1381 ttgaaagcaa aactaatatt tattttctag attatccctg tgaataattg agaacttttt
1441 ggagtcaagt atgaataaag gtgtggcaga atataataat ctggactatt ttctatagga
1501 taattgctgg gttataaaat cttaggtttg cttatgccca gtagctcctg cggaggctta
1561 ataataggca attttgaatt tgttcaaacc tgtaatggct tgtaaacaaa gatgaccatc
1621 agctgtttct cacatctata gtgacaataa agcgggaagt ataagattta ataggagggg
1681 ttaaggttca tgagaaccat ggaaagatgt ggtctgagat gggtgctgca aagatcataa
1741 taaagtcatt tttatagaca gtctaaacaa aatgggtggg gatgtcatgt tttttgccca
1801 attcagcttt tgttctgcct gaacattaat ggcaagtcta gaactctccg aatcctacag
1861 ctttgtaatt ttttttctac aaatgtctaa catccaaaac tgagggttgg gaaaaggact
1921 tccctcctgt agtttttttc atattacttc tcactttata tcttatattc taaatagcta
1981 tcacctcagc agtcttttgc ctattggtta tgttagtatc acattacttc tagcctttca
2041 attactccat gttttattta atatccattg aagtctatga attctctgtt ctggtggcac
2101 agctattcat aacctatatt ctagagtaga caatctggac tatgtaataa atagtctgct
2161 gattttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2221 aaaaaaaaaa aaaaaaaaaa
//