LOCUS BC036443 3291 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens stannin, mRNA (cDNA clone MGC:26142 IMAGE:4823944),
complete cds.
ACCESSION BC036443
VERSION BC036443.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3291)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3291)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: h Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29893560.
FEATURES Location/Qualifiers
source 1..3291
/db_xref="H-InvDB:HIT000051696"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26142 IMAGE:4823944"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3291
/gene="SNN"
/db_xref="GeneID:8303"
/db_xref="HGNC:HGNC:11149"
/db_xref="MIM:603032"
CDS 166..432
/gene="SNN"
/codon_start=1
/product="stannin"
/protein_id="AAH36443.1"
/db_xref="GeneID:8303"
/db_xref="HGNC:HGNC:11149"
/db_xref="MIM:603032"
/translation="MSIMDHSPTTGVVTVIVILIAIAALGALILGCWCYLRLQRISQS
EDEESIVGDGETKEPFLLVQYSAKGPCVERKAKLMTPNGPEVHG"
BASE COUNT 741 a 843 c 907 g 800 t
ORIGIN
1 agcggggccg gaccgggcgg gcggagccgg gcccgcgggg ctgctgcggg gcgatcgggc
61 cgggccgctg ccgcgccatg gactcccgtg tccagcctga gttccagcct cactgagtgg
121 ccacccccaa agtgctgcca gccgaggaag cccccagcac tgaccatgtc tattatggac
181 cacagcccca ccacgggcgt ggtcacagtc atcgtcatcc tcattgccat cgcggccctg
241 ggggccttga tcctgggctg ctggtgctac ctgcggctgc agcgcatcag ccagtcagag
301 gacgaggaga gcatcgtggg ggatggggag accaaggaac ccttcctgct ggtgcagtat
361 tcggccaagg gaccgtgcgt ggagagaaag gccaagctga tgactcccaa cggcccggaa
421 gtccacggct gagccaggat gcaaggctcc tggtcctgtt tgcagccggc caagaggcgc
481 tgggaggggc aaaaccatac ggatgcgctg ctgtctgaga ggaagggctg acacttgctg
541 gcatggcctc tgcgggcttc gtcatcgcat gcactgatgc ccggggacct ggctgtcctg
601 ggcttcccct cggcctccag gtgaggctgc ccattgcagg cactgggcag gcctgacctt
661 gctggggctc atggccctgt agcgcttttg ttacttgaat gtctagctga gcctgttttt
721 gatggagcta ctactgtaat gcgtgaacta acaaacctgt gaactgtaaa taggcccctg
781 gaagcacgtg cttaagccct tttgctgatt tttaaaaata tcatctagcg cacacgggac
841 tggtattctg gctgtactaa tgacaagctg agtcaagacc ctggagggtc ataggcttgt
901 aaaggcccac gccacactcg gcaggggtct ctcatgtgtg tccatctgcg tgtatgtcaa
961 ggaagtgaga tgccaatttg gggtcttgag gctgaccagt tggggtgctt gggtgatctc
1021 tgcttcatta gtcatgggtg gaagaaaaac cacacccccc gcacccctcc gttctttctg
1081 catagactca cttgttaaat agcagttctg ttgagagtgg agttactgca gggaagctac
1141 cggacctgcc tgggagccag tgaagggcga gtcagggcac gcgtcctgga ggctgccagc
1201 gtccttgtag cagagcagtt tcttgccgct tgggtcttca gcacgccaag ccccccacca
1261 accctccacc ccgagtgaag gcttcgctga aattgctttg gtcctcatag agcctgtggt
1321 ggctactttt ggtctgaaac ccacttggcc caggaaagag aaaaggttgt atgttttgtg
1381 ttggtgtttc ctattttctg cactggaggg gaggggactg ttgaggttct gtcttttttc
1441 ttcttttcct cttccctctt cacatcactt ggcttccttt cctctctgat gaccgtccgc
1501 ctatggggtt ctgacttcac tttcctcagc gggtctccag tcccctgacc cagctctaaa
1561 ggcacttagg acccagggaa catttctcac gtgcacattc ccctaagagc caccagactg
1621 cttcctgcca gcctgtgctt gcggcaggga gccggggcag ggcagaggtg aacttgaagt
1681 tcaggacttg actctcccac aggtggtgag ctggtggctc tctggtgagc tagtgtctcc
1741 acagcctgtc tccaaggcct cccctatgta catttcagtg agctcacttt gatttttaat
1801 cccaccacaa gcacatacta attttattta tgattcaaat gtgactcgtg cctgcccatc
1861 cctgtaatag atggaaggtc agccccggct taaccacaga gcactggccc ttcatggctg
1921 agctcagagc tctggcctcc tgctcagact aaaggcacct cctctggcct cacccaagcc
1981 tcttctaaaa accatgttga atgaatccac gttctggaac cccgaggcgg gagaagtagg
2041 gagctgttcg tttaagcagc atacacctaa attgggggtt taaacattaa gtaggagctt
2101 ggggtggaag agggacagcc ggctgggcca cctgagcaga aggtggtaat gaaacacctc
2161 agctgggctc ttgggagacc ttaggaagca ggagaggcaa cacctctggc tactgatggt
2221 gtggcaagtt cagaagaggt ggtggtgggg taggcgtgat gtcagcagaa gccctgcagg
2281 ctgggtgggc aggacacgtg gtgggggcca ctgaaaccag gcctaggagg gagaacaagt
2341 tccaaaggtg ccgactggaa gaagggggta aaagtttgct ttggtgagtg agaaaaggct
2401 ggggcgtgtg atccatcccc tcacgtttca gaacttccag gctttctacc tcgactctca
2461 ccacagccag cacatacacc taggctgttt ttccttcctc cacacctgag ggacgcagca
2521 acagctagga tctgcatttt caggttccga gcctgacccc tggaactgac cagcgctcga
2581 ttgtcagcct tggcctgggg ttttgacctt gccagtgaag tttcggtttt gaagtgatta
2641 aatgtcactt cctcatcagt ttcacttctg gaggttttct tatcctactc cctggtgcca
2701 gggacgtacc tgggagtttg aatcaggccc atttgagcgt ggcagccgtg ttgggtgaag
2761 gtccggggct cggtgaggca ctgggggggt tttcgggagg aaaatgaaaa tgcttctaga
2821 atgagtgaac cacatcatag ctctcactgt tttttcaata gctacttttt ttagcagaca
2881 ccagagccac actcaaatgg ctaagtaggt tatgacctct ctggattatt tttgaatgcc
2941 caactgttgc attcaagttt tctgactaat aagaaattaa gcattcatcc ttcgtatcac
3001 tgcagaagca acagtggggg cacagggagg gaactcttga cactgagcca ctaaaatatg
3061 gactaatttt ttggacaaat cttcaaacgg actgtgctac tgtatttgtc tcaaagctac
3121 caagtttgtg caataagtgg aagggatgtc atccttcttc aataaatgct gaatgacatt
3181 caagctgatt ttctagacca ctgagaaaat ctttatttac aataaatttc aataaaattt
3241 gcataaatat attcccaaaa aaaaaaaaaa aaaaaaagaa aaaaaaaaaa a
//