LOCUS BC036391 1975 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens CUG triplet repeat, RNA binding protein 2, mRNA (cDNA
clone MGC:41846 IMAGE:5260623), complete cds.
ACCESSION BC036391
VERSION BC036391.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1975)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1975)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: c Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5729815.
FEATURES Location/Qualifiers
source 1..1975
/db_xref="H-InvDB:HIT000051691"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41846 IMAGE:5260623"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1975
/gene="CUGBP2"
/gene_synonym="BRUNOL3"
/gene_synonym="ETR-3"
/gene_synonym="NAPOR"
/db_xref="GeneID:10659"
/db_xref="MIM:602538"
CDS 169..1734
/gene="CUGBP2"
/gene_synonym="BRUNOL3"
/gene_synonym="ETR-3"
/gene_synonym="NAPOR"
/codon_start=1
/product="CUGBP2 protein"
/protein_id="AAH36391.1"
/db_xref="GeneID:10659"
/db_xref="MIM:602538"
/translation="MMVEGRLLVPDRINGTANKMNGALDHSDQPDPDAIKMFVGQIPR
SWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIK
TLPGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSPFGQIEECRILR
GPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPIVVKFADTQKDKEQRRLQQ
QLAQQMQQLNTATWGNLTGLGGLTPQYLALLQQATSSSNLGAFSGIQQMAGMNALQLQ
NLATLAAAAAAAQTSATSTNANPLSTTSSALGALTSPVAASTPNSTAGAAMNSLTSLG
TLQGLAGATVGLNNINALAGTINTPRSKRLLLPKDNNGMAALNGGLGATGLTNGTAGT
MDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQ
DILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK
VQLKRSKNDSKPY"
BASE COUNT 505 a 570 c 491 g 409 t
ORIGIN
1 agcgggagtg ccggctcggc ggccgccggg ggaggccgcg cgcacctgtc cctgcccgtc
61 tcgcgccgcc cgcggccgct cggacgcgcg cagagccgcc ccccgccgct gccgccgcgt
121 gcgcccgcga acatgacttc tgccttcaag ctggatttcc tcccggacat gatggtcgag
181 ggccgcctgc tcgttcctga cagaattaac ggcacagcca acaagatgaa cggagctttg
241 gatcactcag accaaccaga cccagatgcc attaagatgt ttgtcggaca gatcccccgg
301 tcatggtcgg aaaaggagct gaaagaactt tttgagcctt acggagccgt ctaccagatc
361 aacgtcctcc gggaccggag tcagaaccct ccgcagagta aaggttgttg tttcgtaaca
421 ttttatacaa gaaaagctgc acttgaggcc cagaatgcac tgcacaatat taaaacttta
481 cctgggatgc atcatcccat tcagatgaaa cctgcagata gtgaaaagtc caacgctgtg
541 gaagacagaa aattgttcat aggaatggta tcgaagaaat gtaatgagaa cgacatcagg
601 gtgatgttct ctccatttgg ccagatagaa gaatgccgga tactccgggg acctgatggg
661 ctgagtcgag gctgtgcgtt tgtcacattt tctacaaggg caatggcaca gaatgcaatc
721 aaagccatgc atcagtctca gaccatggag ggctgctctt cacctatcgt ggtgaagttt
781 gctgacactc agaaggacaa agagcaaagg cgcctccagc agcagctcgc tcagcagatg
841 cagcagctca acactgccac ctgggggaac ctgacagggc tgggcggact gaccccacag
901 tatctggcgc tcctgcagca ggccacctcc tccagcaacc tgggtgcgtt cagcggcatt
961 caacaaatgg caggcatgaa tgctttacag ttgcagaacc tggcgacgct ggctgctgct
1021 gcagctgcgg cccagacctc agccaccagc accaatgcaa accctctctc taccacgagc
1081 agcgccctgg gagccctcac gagtcccgtg gctgcttcaa cccccaactc cactgctggt
1141 gcagccatga actccttgac ctctctcggg actctgcaag gactggctgg agccactgtt
1201 ggactgaata atattaatgc actagcaggt accatcaaca ctcccagaag caaaaggctt
1261 ttacttccaa aagataacaa cggtatggcg gctctgaatg gaggacttgg cgccacaggc
1321 ttgacgaatg gcacggctgg caccatggac gccctcaccc aggcctactc aggaattcaa
1381 cagtacgcag ccgccgcgct gcccactctg tacagccaga gcctgctgca gcagcagagc
1441 gctgcaggca gccagaagga aggtccagag ggggcaaacc tctttattta ccaccttcca
1501 caggaatttg gagaccagga cattctgcag atgttcatgc cttttggaaa tgttatctct
1561 gctaaagtct tcattgacaa acagaccaat ctgagcaagt gctttggttt tgttagctac
1621 gacaatccag tctctgcaca agctgctatc caagctatga atggctttca gatcggcatg
1681 aaacgcttga aggtgcagct gaagcgttcc aaaaacgaca gcaaacctta ctgatcctaa
1741 ccccagaggc tccctgctct cattttagct ttcttagggt aagtcccacg agccagcctg
1801 tctcaacagg gaaggcagag gaggaccaca ttgccaactt ttaccaagag agacggttat
1861 ttttacaata aggcctccat gtccccaccc acttccccta cccagtttgc cataattaaa
1921 acttgggcta ctttgtttct attgagtaat tcctcctcca aaaaaaaaaa aaaaa
//