LOCUS BC036360 1708 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chondroadherin, mRNA (cDNA clone MGC:34613
IMAGE:5163623), complete cds.
ACCESSION BC036360
VERSION BC036360.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1708)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1708)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: i Column: 13.
FEATURES Location/Qualifiers
source 1..1708
/db_xref="H-InvDB:HIT000051678"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34613 IMAGE:5163623"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1708
/gene="CHAD"
/gene_synonym="SLRR4A"
/db_xref="GeneID:1101"
/db_xref="HGNC:HGNC:1909"
/db_xref="MIM:602178"
CDS 52..1131
/gene="CHAD"
/gene_synonym="SLRR4A"
/codon_start=1
/product="chondroadherin"
/protein_id="AAH36360.1"
/db_xref="GeneID:1101"
/db_xref="HGNC:HGNC:1909"
/db_xref="MIM:602178"
/translation="MVRPMLLLSLGLLAGLLPALAACPQNCHCHSDLQHVICDKVGLQ
KIPKVSEKTKLLNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLI
YLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIR
ELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKL
RVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLE
NNRLNQLPSNFPFDSLETLALTNNPWKCTCQLRGLRRWLEAKASRPDATCASPAKFKG
QHIRDTDAFRSCKFPTKRSKKAGRH"
BASE COUNT 362 a 618 c 400 g 328 t
ORIGIN
1 cgcgccccgc cgccgctgct gcccccagcc ccggccccag gcgtcccagc catggtccgc
61 ccaatgctct tgctcagcct cggcctcctg gctggtctgc tgccggcgct ggccgcctgc
121 ccccagaact gccactgcca cagcgacctg cagcacgtca tctgcgacaa ggtggggctg
181 cagaagatcc ccaaggtgtc agagaagacc aagctgctca acctacagcg caacaacttc
241 ccggtgctgg ctgccaattc gttccgggcc atgccgaacc tcgtgtcatt gcacctgcag
301 cactgccaga tccgcgaggt ggccgccggt gccttccgcg gcctcaagca acttatctac
361 ttgtacctgt cccataacga catccgcgtg ctgcgcgcag gtgccttcga cgacctgacc
421 gagctgacct acctctacct ggaccacaac aaggtcactg agctgccccg ggggttgctc
481 tccccgctgg tcaacctctt catcttgcag ctcaacaaca acaagatccg tgagctgcgc
541 gcaggcgcct tccagggagc caaggacctg cgctggctct acctgtcgga aaacgcgttg
601 agctccctgc agcccggggc cctggacgac gtggagaacc tcgccaaatt ccacgtggac
661 aggaaccagc tgtccagcta cccctcagct gccctgagca agctacgggt ggtggaggag
721 ctgaagctgt cccacaaccc cctgaaaagc atcccggaca atgccttcca gtcctttggc
781 agatacctgg agaccctctg gctggacaac accaacctgg agaagttctc agatggtgcc
841 ttcctgggtg taaccacgct gaaacacgtc catttggaga acaaccgctt gaaccagcta
901 ccctccaact tccccttcga cagcctggag accctcgccc ttaccaataa cccctggaag
961 tgtacctgcc agctccgggg ccttcggcgg tggctggaag ccaaggcctc ccgcccagat
1021 gccacctgtg cctcacctgc caagttcaag ggccagcaca tccgtgacac ggacgccttc
1081 cgcagctgca agttccccac caagaggtcc aagaaagctg gccgccatta aacaggttct
1141 gacccagcca gtcctggtga ctggcctctg ccttccaccg gagagactac tgaccttctc
1201 acctccaccc ataccttctc cccacagcct ctgctgatgc acagagctgc ctacacctag
1261 acacgtcctg gcagggggcc tcgggcactc cactaccaac ccagctccac ccagcagtgt
1321 cctggggaga aggaaggctg agcctctccc cagccttcat gccttcccca ccctccagct
1381 cctcttggag aagctgttgc tgagaccccc cccccaagtc aatcagaacc acaacaggtt
1441 ggtcatcagg atggccaccc tcccaggatc atccttcctc tgttcctctt tccctgccac
1501 gtggaaacaa tcatcagatc cttgccccac cccttgcttc cagaaagggt tttaaagccc
1561 atgccccaac tctgccagcc cccacctgcc aggacgttct agcaggacat cggtgctttg
1621 ctgtccatct tcccatgctg caatttcttc ctgagatttc tataaatata aatgtatgta
1681 tgtattataa aaaaaaaaaa aaaaaaaa
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