LOCUS BC036352 2605 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens sodium channel, nonvoltage-gated 1, beta, mRNA (cDNA
clone MGC:34556 IMAGE:5178288), complete cds.
ACCESSION BC036352
VERSION BC036352.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2605)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2605)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 51 Row: o Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506816.
FEATURES Location/Qualifiers
source 1..2605
/db_xref="H-InvDB:HIT000051676"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34556 IMAGE:5178288"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2605
/gene="SCNN1B"
/gene_synonym="ENaCb"
/gene_synonym="ENaCbeta"
/gene_synonym="SCNEB"
/db_xref="GeneID:6338"
/db_xref="HGNC:HGNC:10600"
/db_xref="MIM:600760"
CDS 136..2058
/gene="SCNN1B"
/gene_synonym="ENaCb"
/gene_synonym="ENaCbeta"
/gene_synonym="SCNEB"
/codon_start=1
/product="sodium channel, nonvoltage-gated 1, beta"
/protein_id="AAH36352.2"
/db_xref="GeneID:6338"
/db_xref="HGNC:HGNC:10600"
/db_xref="MIM:600760"
/translation="MHVKKYLLKGLHRLQKGPGYTYKELLVWYCDNTNTHGPKRTICE
GPKKKAMWFLLTLLFAALVCWQWGIFIRTYLSWEVSVSLSVGFKTMDFPAVTICNASP
FKYSKIKHLLKDLDELMEAVLERILAPELSHANATRNLNFSIWNHTPLVLIDERNPHH
PMVLDLFGDNHNGLTSSSASEKICNAHGCKMAMRLCSLNRTQCTFRNFTSATQALTEW
YILQATNIFAQVPQQELVEMSYPGEQMILACLFGAEPCNYRNFTSIFYPHYGNCYIFN
WGMTEKALPSANPGTEFGLKLILDIGQEDYVPFLASTAGVRLMLHEQRSYPFIRDEGI
YAMSGTETSIGVLVDKLQRMGEPYSPCTVNGSEVPVQNFYSDYNTTYSIQACLRSCFQ
DHMIRNCNCGHYLYPLPRGEKYCNNRDFPDWAHCYSDLQMSVAQRETCIGMCKESCND
TQYKMTISMADWPSEASEDWIFHVLSQERDQSTNITLSRKGIVKLNIYFQEFNYRTIE
ESAANNIVWLLSNLGGQFGFWMGGSVLCLIEFGEIIIDFVWITIIKLVALAKSLRQRR
AQASYAGPPPTVAELVEAHTNFGFQPDTAPRSPNTGPYPSEQALPIPGTPPPNYDSLR
LQPLDVIESDSEGDAI"
BASE COUNT 609 a 821 c 665 g 510 t
ORIGIN
1 cgccgcgctc gccgggtgtc ccagtgtcac caacactcgg ccgccgccgc cagcttggcg
61 cgcaccgccg cctccgccac cgccgacagc gcgcatcctc cgtgtccccg ctccgccgcc
121 cgagcaggtg ccactatgca cgtgaagaag tacctgctga agggcctgca tcggctgcag
181 aagggccccg gctacacgta caaggagctg ctggtgtggt actgcgacaa caccaacacc
241 cacggcccca agcgcaccat ctgtgagggg cccaagaaga aagccatgtg gttcctgctc
301 accctgctct tcgccgccct cgtctgctgg cagtggggca tcttcatcag gacctacttg
361 agctgggagg tcagcgtctc cctctccgta ggcttcaaga ccatggactt ccctgccgtc
421 accatctgca atgctagccc cttcaagtat tccaaaatca agcatttgct gaaggacctg
481 gatgagctga tggaagctgt cctggagaga atcctggctc ctgagctaag ccatgccaat
541 gccaccagga acctgaactt ctccatctgg aaccacacac ccctggtcct tattgatgaa
601 cggaaccccc accaccccat ggtccttgat ctctttggag acaaccacaa tggcttaaca
661 agcagctcag catcagaaaa gatctgtaat gcccacgggt gcaaaatggc catgagacta
721 tgtagcctca acaggaccca gtgtaccttc cggaacttca ccagtgctac ccaggcattg
781 acagagtggt acatcctgca ggccaccaac atctttgcac aggtgccaca gcaggagcta
841 gtagagatga gctaccccgg cgagcagatg atcctggcct gcctattcgg agctgagccc
901 tgcaactacc ggaacttcac gtccatcttc taccctcact atggcaactg ttacatcttc
961 aactggggca tgacagagaa ggcacttcct tcggccaacc ctggaactga attcggcctg
1021 aagttgatcc tggacatagg ccaggaagac tacgtcccct tccttgcgtc cacggccggg
1081 gtcaggctga tgcttcacga gcagaggtca taccccttca tcagagatga gggcatctac
1141 gccatgtcgg ggacagagac gtccatcggg gtactcgtgg acaagcttca gcgcatgggg
1201 gagccctaca gcccgtgcac cgtgaatggt tctgaggtcc ccgtccaaaa cttctacagt
1261 gactacaaca cgacctactc catccaggcc tgtcttcgct cctgcttcca agaccacatg
1321 atccgtaact gcaactgtgg ccactacctg tacccactgc cccgtgggga gaaatactgc
1381 aacaaccggg acttcccaga ctgggcccat tgctactcag atctacagat gagcgtggcg
1441 cagagagaga cctgcattgg catgtgcaag gagtcctgca atgacaccca gtacaagatg
1501 accatctcca tggctgactg gccttctgag gcctccgagg actggatttt ccacgtcttg
1561 tctcaggagc gggaccaaag caccaatatc accctgagca ggaagggaat tgtcaagctc
1621 aacatctact tccaagaatt taactatcgc accattgaag aatcagcagc caataacatc
1681 gtctggctgc tctcgaatct gggtggccag tttggcttct ggatgggggg ctctgtgctg
1741 tgcctcatcg agtttgggga gatcatcatc gactttgtgt ggatcaccat catcaagctg
1801 gtggccttgg ccaagagcct acggcagcgg cgagcccaag ccagctacgc tggcccaccg
1861 cccaccgtgg ccgagctggt ggaggcccac accaactttg gcttccagcc tgacacggcc
1921 ccccgcagcc ccaacactgg gccctacccc agtgagcagg ccctgcccat cccaggcacc
1981 ccgcccccca actatgactc cctgcgtctg cagccgctgg acgtcatcga gtctgacagt
2041 gagggtgatg ccatctaacc ctgcccctgc ccaccccggg cggctgaaac tcactgagca
2101 gccaagactg ttgcccgagg cctcactgta tggtgccctc tccaaagggt cgggagggta
2161 gctctccagg ccagagcttg tgtccttcaa cagagaggcc agcggcaact ggtccgttac
2221 tggccaaggg ctctgtagaa tcacggtgct ggtacaggat gcaggaataa attgtatctt
2281 cacctggttc ctaccctcgt ccctacctgt cctgatcctg gtcctgaaga cccctcggaa
2341 caccctctcc tggtggcagg ccacttccct cccagtgcca gtctccatcc accccagaga
2401 ggaacaggcg ggtgggccat gtggttttct ccttcctggc cttggctggc ctctggggca
2461 ggggtggtgg agagatggaa gggcatcagg tgtagggacc ctgccaagtg gcacctgatt
2521 tactctagaa aataaaagta gaaaatactg agtccaaaaa aaaaaaaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaa
//