LOCUS BC036341 1839 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens spondin 2, extracellular matrix protein, mRNA (cDNA
clone MGC:35367 IMAGE:5183118), complete cds.
ACCESSION BC036341
VERSION BC036341.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1839)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1839)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: d Column: 8.
FEATURES Location/Qualifiers
source 1..1839
/db_xref="H-InvDB:HIT000051672"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35367 IMAGE:5183118"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1839
/gene="SPON2"
/gene_synonym="DIL-1"
/gene_synonym="DIL1"
/gene_synonym="M-spondin"
/gene_synonym="Mindin"
/db_xref="GeneID:10417"
/db_xref="HGNC:HGNC:11253"
/db_xref="MIM:605918"
CDS 269..1264
/gene="SPON2"
/gene_synonym="DIL-1"
/gene_synonym="DIL1"
/gene_synonym="M-spondin"
/gene_synonym="Mindin"
/codon_start=1
/product="spondin 2, extracellular matrix protein"
/protein_id="AAH36341.1"
/db_xref="GeneID:10417"
/db_xref="HGNC:HGNC:11253"
/db_xref="MIM:605918"
/translation="MENPSPAAALGKALCALLLATLGAAGQPLGGESICSARAPAKYS
ITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAHSSDYSMWRKNQYVSNGLRDFAERGE
AWALMKEIEAAGEALQSVHEVFSAPAVPSGTGQTSAELEVQRRHSLVSFVVRIVPSPD
WFVGVDSLDLCDGDRWREQAALDLYPYDAGTDSGFTFSSPNFATIPQDTVTEITSSSP
SHPANSFYYPRLKALPPIARVTLLRLRQSPRAFIPPAPVLPSRDNEIVDSASVPETPL
DCEVSLWSSWGLCGGHCGRLGTKSRTRYVRVQPANNGSPCPELEEEAECVPDNCV"
BASE COUNT 328 a 620 c 569 g 322 t
ORIGIN
1 ggaagagggt gatccgaccc ggggaaggtc gctgggcagg gcgagttggg aaagcggcag
61 cccccgccgc ccccgcagcc ccttctcctc ctttctccca cgtcctatct gcctctcgct
121 ggaggccagg ccgtgcagca tcgaagacag gaggaactgg agcctcattg gccggcccgg
181 ggcgccggcc tcgggcttaa ataggagctc cgggctctgg ctgggacccg accgctgccg
241 gccgcgctcc cgctgctcct gccgggtgat ggaaaacccc agcccggccg ccgccctggg
301 caaggccctc tgcgctctcc tcctggccac tctcggcgcc gccggccagc ctcttggggg
361 agagtccatc tgttccgcca gagccccggc caaatacagc atcaccttca cgggcaagtg
421 gagccagacg gccttcccca agcagtaccc cctgttccgc ccccctgcgc agtggtcttc
481 gctgctgggg gccgcgcata gctccgacta cagcatgtgg aggaagaacc agtacgtcag
541 taacgggctg cgcgactttg cggagcgcgg cgaggcctgg gcgctgatga aggagatcga
601 ggcggcgggg gaggcgctgc agagcgtgca cgaggtgttt tcggcgcccg ccgtccccag
661 cggcaccggg cagacgtcgg cggagctgga ggtgcagcgc aggcactcgc tggtctcgtt
721 tgtggtgcgc atcgtgccca gccccgactg gttcgtgggc gtggacagcc tggacctgtg
781 cgacggggac cgttggcggg aacaggcggc gctggacctg tacccctacg acgccgggac
841 ggacagcggc ttcaccttct cctcccccaa cttcgccacc atcccgcagg acacggtgac
901 cgagataacg tcctcctctc ccagccaccc ggccaactcc ttctactacc cgcggctgaa
961 ggccctgcct cccatcgcca gggtgacact gctgcggctg cgacagagcc ccagggcctt
1021 catccctccc gccccagtcc tgcccagcag ggacaatgag attgtagaca gcgcctcagt
1081 tccagaaacg ccgctggact gcgaggtctc cctgtggtcg tcctggggac tgtgcggagg
1141 ccactgtggg aggctcggga ccaagagcag gactcgctac gtccgggtcc agcccgccaa
1201 caacgggagc ccctgccccg agctcgaaga agaggctgag tgcgtccctg ataactgcgt
1261 ctaagaccag agccccgcag cccctggggc cccccggagc catggggtgt cgggggctcc
1321 tgtgcaggct catgctgcag gcggccgagg gcacaggggg tttcgcgctg ctcctgaccg
1381 cggtgaggcc gcgccgacca tctctgcact gaagggccct ctggtggccg gcacgggcat
1441 tgggaaacag cctcctcctt tcccaacctt gcttcttagg ggcccccgtg tcccgtctgc
1501 tctcagcctc ctcctcctgc aggataaagt catccccaag gctccagcta ctctaaatta
1561 tgtctcctta taagttattg ctgctccagg agattgtcct tcatcgtcca ggggcctggc
1621 tcccacgtgg ttgcagatac ctcagacctg gtgctctagg ctgtgctgag cccactctcc
1681 cgagggcgca tccaagcggg ggccacttga gaagtgaata aatggggcgg tttcggaagc
1741 gtcagtgttt ccatgttatg gatctctctg cgtttgaata aagactatct ctgttgctca
1801 cgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//