LOCUS BC036319 2630 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens phosphodiesterase 4D, cAMP-specific (phosphodiesterase
E3 dunce homolog, Drosophila), mRNA (cDNA clone MGC:42769
IMAGE:4828512), complete cds.
ACCESSION BC036319
VERSION BC036319.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2630)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2630)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: d Column: 10.
FEATURES Location/Qualifiers
source 1..2630
/db_xref="H-InvDB:HIT000051668"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42769 IMAGE:4828512"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2630
/gene="PDE4D"
/gene_synonym="HSPDE4D"
/gene_synonym="PDE4DN2"
/gene_synonym="STRK1"
/db_xref="GeneID:5144"
/db_xref="MIM:600129"
CDS 399..1955
/gene="PDE4D"
/gene_synonym="HSPDE4D"
/gene_synonym="PDE4DN2"
/gene_synonym="STRK1"
/codon_start=1
/product="PDE4D protein"
/protein_id="AAH36319.1"
/db_xref="GeneID:5144"
/db_xref="MIM:600129"
/translation="MPEANYLLSVSWGYIKFKRMLNRELTHLSEMSRSGNQVSEFISN
TFLDKQHEVEIPSPTQKEKEKKKRPMSQISGVKKLMHSSSLTNSSIPRFGVKTEQEDV
LAKELEDVNKWGLHVFRIAELSGNRPLTVIMHTIFQERDLLKTFKIPVDTLITYLMTL
EDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGV
FNQFLINTNSELALMYNDSSVLENHHLAVGFKLLQEENCDIFQNLTKKQRQSLRKMVI
DIVLATDMSKHMNLLADLKTMVETKKVTSSGVLLLDNYSDRIQVLQNMVHCADLSNPT
KPLQLYRQWTDRIMEEFFRQGDRERERGMEISPMCDKHNASVEKSQVGFIDYIVHPLW
ETWADLVHPDAQDILDTLEDNREWYQSTIPQSPSPAPDDPEEGRQGQTEKFQFELTLE
EDGESDTEKDSGSQVEEDTSCSDSKTLCTQDSESTEIPLDEQVEEEAVGEEEESQPEA
CVIDDRSPDT"
BASE COUNT 822 a 506 c 551 g 751 t
ORIGIN
1 agttccttat ttggtagctt ttgacaggac tagcctttct tgcaactaag catcttgaca
61 tacattattc attaagccct ggagctcggg agagaaagat gcagaccctt agatctttag
121 atattccttt atcacgtgga ttttctttat tcagaatagt tgctgaattt tgtgccattc
181 tggagtctta caaatggcat gtattcgatg ggaagacggc tggatgggat ttaatgcgag
241 gctttcttat gtatacttaa ttaccaaaaa tctttaaaaa ctcatactct gcgtggcttg
301 tggaggttgt taaagtgtcg agattttgaa gctaaataca ttttagagct tactatatat
361 atacatatat atatatatat acatataatc aatcaaaaat gcctgaagca aactatttac
421 tgtcagtgtc ttggggctac ataaagttta aaaggatgct taatcgggag ctcacccatc
481 tctctgaaat gagtcggtct ggaaatcaag tgtcagagtt tatatcaaac acattcttag
541 ataagcaaca tgaagtggaa attccttctc caactcagaa ggaaaaggag aaaaagaaaa
601 gaccaatgtc tcagatcagt ggagtcaaga aattgatgca cagctctagt ctgactaatt
661 caagtatccc aaggtttgga gttaaaactg aacaagaaga tgtccttgcc aaggaactag
721 aagatgtgaa caaatggggt cttcatgttt tcagaatagc agagttgtct ggtaaccggc
781 ccttgactgt tatcatgcac accatttttc aggaacggga tttattaaaa acatttaaaa
841 ttccagtaga tactttaatt acatatctta tgactctcga agaccattac catgctgatg
901 tggcctatca caacaatatc catgctgcag atgttgtcca gtctactcat gtgctattat
961 ctacacctgc tttggaggct gtgtttacag atttggagat tcttgcagca atttttgcca
1021 gtgcaataca tgatgtagat catcctggtg tgttcaatca atttctgatc aatacaaact
1081 ctgaacttgc cttgatgtac aatgattcct cagtcttaga gaaccatcat ttggctgtgg
1141 gctttaaatt gcttcaggaa gaaaactgtg acattttcca gaatttgacc aaaaaacaaa
1201 gacaatcttt aaggaaaatg gtcattgaca tcgtacttgc aacagatatg tcaaaacaca
1261 tgaatctact ggctgatttg aagactatgg ttgaaactaa gaaagtgaca agctctggag
1321 ttcttcttct tgataattat tccgatagga ttcaggttct tcagaatatg gtgcactgtg
1381 cagatctgag caacccaaca aagcctctcc aactgtaccg ccagtggacg gaccggataa
1441 tggaggagtt cttccgccaa ggagaccgag agagggaacg tggcatggag ataagcccca
1501 tgtgtgacaa gcacaatgct tccgtggaaa aatcacaggt gggcttcata gactatattg
1561 ttcatcccct ctgggagaca tgggcagacc tcgtccaccc tgacgcccag gatattttgg
1621 acactttgga ggacaatcgt gaatggtacc agagcacaat ccctcagagc ccctctcctg
1681 cacctgatga cccagaggag ggccggcagg gtcaaactga gaaattccag tttgaactaa
1741 ctttagagga agatggtgag tcagacacgg aaaaggacag tggcagtcaa gtggaagaag
1801 acactagctg cagtgactcc aagactcttt gtactcaaga ctcagagtct actgaaattc
1861 cccttgatga acaggttgaa gaggaggcag taggggaaga agaggaaagc cagcctgaag
1921 cctgtgtcat agatgatcgt tctcctgaca cgtaacagtg caaaaacttt catgcctttt
1981 ttttttttaa gtagaaaaat tgtttccaaa gtgcatgtca catgccacaa ccacggtcac
2041 acctcactgt catctgccag gacgtttgtt gaacaaaact gaccttgact actcagtcca
2101 gcgctcagga atatcgtaac cagttttttc acctccatgt catccgagca aggtggacat
2161 cttcacgaac agcgttttta acaagatttc agcttggtag agctgacaaa gcagataaaa
2221 tctactccaa attattttca agagagtgtg actcatcagg cagcccaaaa gtttattgga
2281 cttggggttt ctattccttt ttatttgttt gcaatatttt cagaagaaag gcattgcaca
2341 gagtgaactt aatggacgaa gcaacaaata tgtcaagaac aggacatagc acgaatctgt
2401 taccagtagg aggaggatga gccacagaaa ttgcataatt ttctaatttc aagtcttcct
2461 gatacatgac tgaatagtgt acatgactga atagtgtggt tcagtgagct gcactgacct
2521 ctacattttg tatgatatgt aaaacagatt ttttgtagag cttactttta ttattaaatg
2581 tattgaggta ttatatttaa aaaaaactat gttcaaaaaa aaaaaaaaaa
//