LOCUS BC036101 2565 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens fucosyltransferase 9 (alpha (1,3) fucosyltransferase),
mRNA (cDNA clone MGC:33876 IMAGE:5286309), complete cds.
ACCESSION BC036101
VERSION BC036101.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2565)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2565)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: i Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 36951077.
FEATURES Location/Qualifiers
source 1..2565
/db_xref="H-InvDB:HIT000051628"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33876 IMAGE:5286309"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2565
/gene="FUT9"
/gene_synonym="Fuc-TIX"
/db_xref="GeneID:10690"
/db_xref="HGNC:HGNC:4020"
/db_xref="MIM:606865"
CDS 319..1398
/gene="FUT9"
/gene_synonym="Fuc-TIX"
/codon_start=1
/product="fucosyltransferase 9 (alpha (1,3)
fucosyltransferase)"
/protein_id="AAH36101.1"
/db_xref="GeneID:10690"
/db_xref="HGNC:HGNC:4020"
/db_xref="MIM:606865"
/translation="MTSTSKGILRPFLIVCIILGCFMACLLIYIKPTNSWIFSPMESA
SSVLKMKNFFSTKTDYFNETTILVWVWPFGQTFDLTSCQAMFNIQGCHLTTDRSLYNK
SHAVLIHHRDISWDLTNLPQQARPPFQKWIWMNLESPTHTPQKSGIEHLFNLTLTYRR
DSDIQVPYGFLTVSTNPFVFEVPSKEKLVCWVVSNWNPEHARVKYYNELSKSIEIHTY
GQAFGEYVNDKNLIPTISACKFYLSFENSIHKDYITEKLYNAFLAGSVPVVLGPSREN
YENYIPADSFIHVEDYNSPSELAKYLKEVDKNNKLYLSYFNWRKDFTVNLPRFWESHA
CLACDHVKRHQEYKSVGNLEKWFWN"
BASE COUNT 786 a 508 c 465 g 806 t
ORIGIN
1 ggcgaagccg gagatgggca gagagcgcgc gcggcgcagc agctccagat tcactgctct
61 cccctgcagc tccccgcgcc cccgccgctg tcgctgcctc ggtgtccccc agccccagtc
121 gcgctcttag gacagcgccg ccaccgccgc ctggccctgc ctgcctcctg cgccgcgcag
181 ccctcgcgag cgccccggaa ggcgctttac ccctaggacc gatttagaat gtaataactc
241 aaggatttga taatacagtg aagtagtata acaactgtct acgtgcttcc catgatatgt
301 tctctatatt gaaaaattat gacatcaaca tccaaaggaa ttcttcgccc atttttgatt
361 gtctgcatta tcctgggctg tttcatggca tgtcttctca tttacatcaa acctaccaac
421 agctggatct tcagtccaat ggaatcagcc agctctgtgc tgaaaatgaa aaacttcttt
481 tccaccaaaa ctgattattt taatgaaact actattctgg tgtgggtgtg gccatttggg
541 cagacctttg accttacatc ctgccaagca atgttcaaca tccaaggatg ccatctcaca
601 acggaccgtt cactgtacaa caaatcccat gcagttctga tccatcaccg agacatcagt
661 tgggatctga caaatttacc tcagcaagct aggccaccct tccagaaatg gatttggatg
721 aatttggaat caccaactca cactccccaa aagagtggca ttgagcactt gtttaacctg
781 actctgactt accgccgtga ttcagatatc caagtgcctt atggcttctt gacggtaagc
841 acaaatccct tcgtgtttga agtgccaagc aaagagaaat tggtgtgctg ggttgtgagt
901 aactggaacc ctgagcatgc cagagtcaag tattacaatg agctaagcaa aagcattgaa
961 atccatacct acgggcaagc atttggagaa tatgtcaatg ataaaaattt gattcctacc
1021 atatctgctt gtaaatttta tctttccttt gaaaattcaa tccacaagga ttacatcacg
1081 gaaaagctat acaatgcttt tctggctggc tctgtacctg ttgttctggg accatctagg
1141 gaaaactatg agaattatat tccagcagat tcattcattc atgtggaaga ttataactct
1201 cccagtgagc tagcaaagta tctgaaggaa gtcgacaaaa acaataagtt ataccttagt
1261 tactttaact ggaggaagga tttcactgta aatcttccac gattttggga atcacatgca
1321 tgtttggctt gcgatcatgt gaaaaggcat caagaatata agtctgttgg taatttagag
1381 aaatggtttt ggaattaaaa tttttcatca cttgcacact tgataaatat tttgatgaga
1441 tatcatccaa gtattgagga taagaagaga tgcaacatac tacttttgtg tcacaattta
1501 tttttatcac cctctctagg gtaacgtgta tattttggtg gagattttta aaagctcagc
1561 atgagcaatc attccattcg gttttaaatt atcctgtata tacctaatta tgtgcactgg
1621 agagtaattt attcttcatt atcatttgta aacattgctt tttcacattt ttgtagttgt
1681 ccataatgta agcttgtggt ttgattattg tttccacact gatcagctgt ttaatctatt
1741 tgggaaatga agatgcacat cttaaagtat gtaaaatttt cactaagtat tacaatgtct
1801 agttccaact ttgcatacta taacagagga agaacatgtt gcgattgaat tctaacctct
1861 ttgactccta agatgaatga agtgtataac tgtctctatt tgatctattt tttttacctg
1921 tttatcacat ttgtgaaggt gaaattattc atggagtgaa taagaaagat atgaagcaga
1981 actgttctat tcaggaagct attagacttc tcatttattt tcattaagct gatttgcagc
2041 tacttattct catggtctta aattaaatta ttcaagtatt tttaaatatc caatttgttg
2101 tgattttcag cacctgggaa gtaatcccaa taatacttta gaaaatctaa gacagttctt
2161 tctgctactg atgacactca ttgtcataat aaaacaaata atttcctcaa ataacaaaga
2221 aaaatgatac ctataaatat atttataaat ggtgtcattt atgaacaatg tttaattatg
2281 tatcaattta agattttttt ctgaagccct aatatttaaa atggccttat tttaccatat
2341 ggatataaga tttggctcat aatgatgagc cctatcattt gatttgagtt ctatcattta
2401 agagagccta actaaaatta tcatcaaggt attaaatata agacgttaaa tataataaag
2461 tggggatata tagaaaacac acagtgttag cacagagtaa gatctcaatg cacatttgtt
2521 ggatgaataa ataaatgcaa ttgaattccc aaaaaaaaaa aaaaa
//