LOCUS BC036100 3209 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens stannin, mRNA (cDNA clone MGC:33874 IMAGE:5277179),
complete cds.
ACCESSION BC036100
VERSION BC036100.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3209)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3209)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..3209
/db_xref="H-InvDB:HIT000051627"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33874 IMAGE:5277179"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3209
/gene="SNN"
/db_xref="GeneID:8303"
/db_xref="HGNC:HGNC:11149"
/db_xref="MIM:603032"
CDS 172..438
/gene="SNN"
/codon_start=1
/product="stannin"
/protein_id="AAH36100.1"
/db_xref="GeneID:8303"
/db_xref="HGNC:HGNC:11149"
/db_xref="MIM:603032"
/translation="MSIMDHSPTTGVVTVIVILIAIAALGALILGCWCYLRLQRISQS
EDEESIVGDGETKEPFLLVQYSAKGPCVERKAKLMTPNGPEVHG"
BASE COUNT 696 a 834 c 904 g 775 t
ORIGIN
1 gagtgcgcgg cggccggacc gggcgggcgg agccgggccc gcggggctgc tgcggggcga
61 tcgggccggg ccgctgccgc gccatggcct cccgtgtcca gcctgagttc cagcctcact
121 gagtggccac ccccaaagtg ctgccagccg aggaagcccc cagcactgac catgtctatt
181 atggaccaca gccccaccac gggcgtggtc acagtcatcg tcatcctcat tgccatcgcg
241 gccctggggg ccttgatcct gggctgctgg tgctacctgc ggctgcagcg catcagccag
301 tcagaggacg aggagagcat cgtgggggat ggggagacca aggaaccctt cctgctggtg
361 cagtattcgg ccaagggacc gtgcgtggag agaaaggcca agctgatgac tcccaacggc
421 ccggaagtcc acggctgagc caggatgcaa ggctcctggt cctgtttgca gccggccaag
481 aggcgctggg aggggcaaaa ccatacggat gcgctgctgt ctgagaggaa gggctgacac
541 ttgctggcat ggcctctgcg ggcttcgtca tcgcatgcac tgatgcccgg ggacctggct
601 gtcctgggct tcccctcggc ctccaggtga ggctgcccat tgcaggcact gggcaggcct
661 gaccttgctg gggctcatgg ccctgtagcg cttttgttac ttgaatgtct agctgagcct
721 gtttttgatg gagctactac tgtaatgcgt gaactaacaa acctgtgaac tgtaaatagg
781 cccctggaag cacgtgctta agcccttttg ctgattttta aaaatatcat ctagcgcaca
841 cgggactggt attctggctg tactaatgac aagctgagtc aagaccctgg agggtcatag
901 gcttgtaaag gcccacgcca cactcggcag gggtctctca tgtgtgtcca tctgcgtgta
961 tgtcaaggaa gtgagatgcc aatttggggt cttgaggctg accagttggg gtgcttgggt
1021 gatctctgct tcattagtca tgggtggaag aaaaaccaca caccccgcac ccctccgttc
1081 tttctgcata gactcacttg ttaaatagca gttctgttga gagtggagtt actgcaggga
1141 agctaccgga cctgcctggg agccagtgaa gggcgagtca gggcacgcgt cctggaggct
1201 gccagcgtcc ttgtagcaga gcagtttctt gccgcttggg tcttcagcac gccaagcccc
1261 ccaccaaccc tccaccccga gtgaaggctt cgctgaaatt gctttggtcc tcatagagcc
1321 tgtggtggct acttttggtc tgaaacccac ttggcccagg aaagagaaaa ggttgtatgt
1381 tttgtgttgg tgtttcctat tttctgcact ggaggggagg ggactgttga ggttctgtct
1441 tttttcttct tttcctcttc cctcttcaca tcacttggct tcctttcctc tctgatgacc
1501 gtccgcctat ggggttctga cttcactttc ctcagcgggt ctccagtccc ctgacccagc
1561 tctaaaggca cttaggaccc agggaacatt tctcacgtgc acattcccct aagagccacc
1621 agactgcttc ctgccagcct gtgcttgcgg cagggagccg gggcagggca gaggtgaact
1681 tgaagttcag gacttgactc tcccacaggt ggtgagctgg tggctctctg gtgagctagt
1741 gtctccacag cctgtctcca aggcctcccc tatgtacatt tcagtgagct cactttgatt
1801 tttaatccca ccacaagcac atactaattt tatttatgat tcaaatgtga ctcgtgcctg
1861 cccatccctg taatagatgg aaggtcagcc ccggcttaac cacagagcac tggcccttca
1921 tggctgagct cagagctctg gcctcctgct cagactaaag gcacctcctc tggcctcacc
1981 caagcctctt ctaaaaacca tgttgaatga atccacgttc tggaaccccg aggcgggaga
2041 agtagggagc tgttcgttta agcagcatac acctaaattg ggggtttaaa cattaagtag
2101 gagcttgggg tggaagaggg acagccggct gggccacctg agcagaaggt ggtaatgaaa
2161 cacctcagct gggctcttgg gagaccttag gaagcaggag aggcaacacc tctggctact
2221 gatggtgtgg caagttcaga agaggtggtg gtggggtagg cgtgatgtca gcagaagccc
2281 tgcaggctgg gtgggcagga cacgtagtgg gggccactga aaccaggcct aggagggaga
2341 acaagttcca aaggtgccga ctggaagaag ggggtaaaag tttgctttgg tgagtgagaa
2401 aaggctgggg cgtgtgatcc atcccctcac gtttcagaac ttccaggctt tctacctcga
2461 ctctcaccac agccagcaca tacacctagg ctgtttttcc ttcctccaca cctgagggac
2521 gcagcaacag ctaggatctg cattttcagg ttccgagcct gacccctgga actgaccagc
2581 gctcgattgt cagccttggc ctggggtttt gaccttgcca gtgaagtttc ggttttgaag
2641 tgattaaatg tcacttcctc atcagtttca cttctggagg ttttcttatc ctactccctg
2701 gtgccaggga cgtacctggg agtttgaatc aggcccattt gagcgtggca gccgtgttgg
2761 gtgaaggtcc ggggctcggt gaggcactgg gggggttttc gggaggaaaa tgaaaatgct
2821 tctagaatga gtgaaccaca tcatagctct cactgttttt tcaatagcta ctttttttag
2881 cagacaccag agccacactc aaatggctaa gtaggttatg acctctctgg attatttttg
2941 aatgcccaac tgttgcattc aagttttctg actaataaga aattaagcat tcatccttcg
3001 tatcactgca gaagcaacag tgggggcaca gggagggaac tcttgacact gagccactaa
3061 aatatggact aattttttgg acaaatcttc aaacggactg tgctactgta tttgtctcaa
3121 agctaccaag tttgtgcaat aagtggaagg gatgtcatcc ttcttcaata aatgctgaat
3181 gacattcaag ctgaaaaaaa aaaaaaaaa
//