LOCUS BC036054 1333 bp mRNA linear HUM 18-JAN-2005
DEFINITION Homo sapiens chromosome 18 open reading frame 54, mRNA (cDNA clone
MGC:33382 IMAGE:5273569), complete cds.
ACCESSION BC036054
VERSION BC036054.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1333)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1333)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC036054.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: f Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255175.
FEATURES Location/Qualifiers
source 1..1333
/db_xref="H-InvDB:HIT000051603"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33382 IMAGE:5273569"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescript"
gene 1..1333
/gene="C18orf54"
/gene_synonym="MGC33382"
/db_xref="GeneID:162681"
CDS 46..1164
/gene="C18orf54"
/gene_synonym="MGC33382"
/codon_start=1
/product="C18orf54 protein"
/protein_id="AAH36054.1"
/db_xref="GeneID:162681"
/translation="MAKSKTKHRLCSQESSVSALLASCTLSGSNSSNSDGSFHYKDKL
YRSASQALQAYIDDFDLGQIYPGASTGKINIDEDFTNMSQFCNYIYKPNNAFENLDHK
KHSNFISCRRHTVNDIDSMSLTTDDLLRLPADGSFSYTYVGPSHRTSKKNKKCRGRLG
SLDIEKNPHFQGPYTSMGKDNFVTPVIRSNINGKQCGDKIELLILKAKRNLEQCTEEL
PKSMKKDDSPCSLDKLEADRSWENIPVTFKSPVPVNSDDSPQQTSRAKSAKGVLEDFL
NNDNQSCTLSGGKHHGPVEALKQMLFNLQAVQERFNQNKTTDPKEEIKQVSEDDFSKL
QLKESMIPITRSLQKALHHLSRLRDLVDDTNGERSPKM"
BASE COUNT 509 a 247 c 234 g 343 t
ORIGIN
1 tgtttttaag ggaaatgaat agaaacaatc cactttgaag aagccatggc gaaatcaaag
61 acaaaacata gactttgttc tcaggaatct tcagtatctg ccctgctggc aagctgcacc
121 ctgagtggta gtaattcctc taattctgat ggctcgtttc actataaaga taagctgtac
181 agatctgctt ctcaagctct acaggcttat attgatgatt ttgatctagg ccaaatatat
241 cctggtgcaa gcactggaaa aattaacatt gatgaggatt ttactaatat gtcacagttc
301 tgcaactata tttacaaacc aaacaatgct tttgaaaacc ttgatcacaa aaagcactca
361 aacttcatat cctgtagaag acacaccgtt aatgacatag actccatgag cctaacaact
421 gatgatctat taagactccc agcagatgga tcattttctt atacttatgt tggaccgagt
481 caccgaacga gcaagaaaaa caagaaatgc cgtggaagac tgggttcatt ggacattgag
541 aagaatccac attttcaagg accctacact tccatgggca aggataactt tgttactcct
601 gttatacgct caaatataaa tggaaagcaa tgtggtgaca aaattgaatt gcttatcttg
661 aaggccaaga gaaatctaga gcagtgtact gaagaattac caaagtccat gaaaaaggat
721 gacagtcctt gctcattaga taaacttgaa gcagacagat catgggaaaa tattcctgtt
781 actttcaaat ctcctgttcc cgttaactct gatgatagtc ctcaacaaac ttcaagggca
841 aagagtgcta aaggggttct tgaagacttt ctaaataatg ataatcagag ctgtactctc
901 tctggaggca aacatcatgg tcctgttgaa gccctgaaac aaatgttatt taaccttcaa
961 gcagtacaag aacgttttaa tcaaaataag accacagatc caaaagaaga gattaaacaa
1021 gtttcagaag atgatttctc taaattacag ttgaaggaaa gtatgattcc tattactagg
1081 tcacttcaga aggctttgca ccatttatct cgcctgagag acctggttga tgatacgaat
1141 ggagaacggt caccgaaaat gtgaagagga aaatgaaact gtcaccacga taaatagtca
1201 ccacagaaca aataggcatt ttttctatta cttaaactga caaagtaaat ataagccata
1261 cattaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaccc
1321 aaaaaaaaaa aaa
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