LOCUS BC036050 2841 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 13, mRNA (cDNA clone
MGC:33372 IMAGE:5270468), complete cds.
ACCESSION BC036050
VERSION BC036050.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2841)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2841)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: a Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255075.
FEATURES Location/Qualifiers
source 1..2841
/db_xref="H-InvDB:HIT000051600"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33372 IMAGE:5270468"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2841
/gene="CCDC13"
/gene_synonym="FLJ25467"
/db_xref="GeneID:152206"
/db_xref="HGNC:HGNC:26358"
CDS 87..2234
/gene="CCDC13"
/gene_synonym="FLJ25467"
/codon_start=1
/product="coiled-coil domain containing 13"
/protein_id="AAH36050.1"
/db_xref="GeneID:152206"
/db_xref="HGNC:HGNC:26358"
/translation="MAADESSQNTLRLQFKAMQEMQHKRLQKQMEKKREKELSLKSRA
DDQEEPLEVSDGLSLLHAGEPNSKNSFEKRVLEDEIEHLRNELRETVDENGRLYKLLK
ERDFEIKHLKKKIEEDRFAFTGTAGVAGDVVATKIVELSKKNRLLMAESEGAKTRVKQ
LTNRIQELERELQTALTRLSAKGATDAGAKPPRAQMGDRALLETPEVKALQDRLVATN
LKMSDLRNQIQSVKQELRMAQKVLAREVGEDINVQQLLSSPGTWRGRAQQILVLQSKV
QELEKQLGQARSQSAGTASDELSVYPDPRKLSAQEKNLLRIRSLEREKQEGLEKLASE
RDVLQRELEELKKKFEGMRSRNKLLSSEMKTLKSQMGTLVVKGRHDDELIDALMDQLK
QLQEILGSLSLQEEKTRVSQHHLDQQLNSEAQRSNSLVAQLQAMVAEREAKVRQLEME
IGQLNVHYLRNKGVGEGSSGREVSPAYTQFLEDPGLTKSPASAGDHVGRLGSSRSVTS
LGHTLVESALTRPSLPSPHRTSPRFSDSPEQKGWQAQVSEIKALWQAAEVERDRLTEF
VTVLQKRVEESNSKLLESERKLQEERHRTVVLEQHLEKIRLEPGKASASQRAAPRTKT
GLPTSNNRHNPTGSEKKDPSFAQLSDVPVESQMEELTTRLAIQVEENEMLKAALGSAL
RGKEEDFRMYHEILGQVKSVFLQALRQQKTGKQ"
BASE COUNT 769 a 748 c 869 g 455 t
ORIGIN
1 tgtgggcagc gcgtgtcggc gtccggagga ggtgacctag ccgccgcggt cctagaaggg
61 agaagtggag agagaccgct ggcaggatgg cagcagatga aagctcacag aacactttgc
121 ggctccagtt caaggcaatg caggagatgc agcacaaacg gttacagaag cagatggaga
181 aaaagaggga aaaagaactg agcctcaaaa gcagagctga cgaccaagag gagcccttgg
241 aggtttcaga tggcctcagc cttctccacg caggggagcc aaactcgaaa aatagctttg
301 agaagagggt gcttgaagat gagattgaac accttcgaaa tgagctcagg gaaacggtgg
361 acgagaacgg gcgattgtat aagctgctga aggaaaggga ctttgaaatc aaacacctca
421 aaaagaaaat agaagaggac agatttgcct tcacagggac agccggtgta gccggagacg
481 tggtcgccac caaaattgtg gagctatcaa aaaagaaccg gctgttgatg gcagaatcag
541 agggtgcaaa aaccagggtg aagcagctga ccaatcgcat ccaggagctg gagcgggaac
601 tgcagacagc cctgaccagg ctgtcagcca agggggccac cgacgcagga gccaagccac
661 cgagggccca gatgggagac agagcattgc tggagacccc agaggtgaag gccctgcagg
721 acaggctggt ggccaccaac ttgaagatga gtgacctccg aaaccagatc cagtctgtga
781 agcaggagct gcggatggca cagaaggttt tggccagaga ggttggggaa gacatcaacg
841 ttcagcagct cctatcttcg ccagggacct ggaggggtcg ggctcaacaa attcttgttt
901 tgcagagcaa ggttcaagag cttgagaagc aattgggcca ggcccggagc cagtctgcgg
961 gaacagccag tgatgagttg tctgtctatc cagacccaag gaagctgtcg gcacaggaga
1021 aaaacctgct gaggatccgc agcctggaaa gggaaaaaca ggaaggcttg gagaaacttg
1081 ccagtgaacg ggatgtcctc cagagagagc ttgaagagct aaaaaagaag ttcgagggca
1141 tgaggtctcg gaacaagctg ctgtcaagtg agatgaagac cctcaagagt cagatgggaa
1201 ccctggtggt gaagggccgg catgatgacg agctcatcga cgccctcatg gaccagctga
1261 agcagctaca ggagatccta ggcagcctga gtctgcagga ggagaaaacg cgagtgtccc
1321 agcaccacct ggaccagcaa ctgaacagcg aggctcagcg gagcaacagc ctagtcgccc
1381 agctgcaggc catggtagct gagcgggagg ccaaagtgcg acagctggag atggagatcg
1441 gacaactcaa tgtgcactat cttcggaata aaggagtggg tgaggggtcc agtggccgcg
1501 aggtcagccc tgcctatacc cagttcctgg aggacccagg cctgaccaag tccccggcct
1561 cagcaggcga tcatgttggc aggcttggat cttctcgctc tgtgaccagc ctgggccaca
1621 cactggtgga atctgctctc acgaggcctt ccctgcccag tccccacagg acctcaccta
1681 ggttctcgga ctccccagaa caaaaaggct ggcaggcaca agtgtcagag atcaaggccc
1741 tctggcaggc tgccgaggtg gagcgtgacc ggctcaccga gtttgtcact gtcctgcaga
1801 aacgggtgga ggagagcaac agcaagctcc tggagtcaga gaggaagctg caggaggagc
1861 gacaccgcac cgtggtgctg gagcaacatc tggagaagat acgcctggag ccagggaagg
1921 catcagcctc ccagagagca gctcccagga ccaaaacagg tctgcccacc tctaacaaca
1981 ggcacaaccc aaccgggagc gagaagaagg acccatcctt tgcccagctc tccgatgtgc
2041 ccgtggaatc ccaaatggaa gagctgacaa ccaggctggc catccaggtg gaggagaatg
2101 aaatgctaaa ggctgccctg ggcagtgccc tgcggggaaa ggaggaggac ttccggatgt
2161 accatgagat cctgggccag gtgaaaagtg tcttcctgca ggccctgcgg cagcagaaga
2221 caggcaagca ataggatgac agcccagtgt cggcctggcc gggtgggcag cctcaggtct
2281 tgagaggata agactctgtc tgaggactcc atctgctccg ggaagccagc ccagggcagc
2341 cagctcaacc acttctacca gaagaggctc cttaaggatg accaaaacca atgtctcagg
2401 ccaggaaggc agaagagaag ccctggtggg acactgcagg agaccctggg ctggctgggt
2461 tacagcagca gggaggccca gcagcccact ggcagaggcg agagctctgg gatggcaagg
2521 cggctgtgaa tggacagatg cagtccctcg ggcaggtgtt catcgccctc atcctaggta
2581 ctagccctgg atgtccccat ggcttcacac acagaagagc ccttggttac cctaagtggg
2641 catatccccc atgccactca gccctgccct atcccctcac ccccatcccg gctccatctg
2701 tagccgtcca caccctacac agacttgggg cactatgctc tcaaccagtt tgtcagccca
2761 ctcctcagga cacttcctca ggtgcagacc cttggacttg taataataat aagtattttc
2821 ataaccaaaa aaaaaaaaaa a
//