LOCUS BC036016 3021 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens testis expressed 11, mRNA (cDNA clone MGC:32951
IMAGE:5270970), complete cds.
ACCESSION BC036016
VERSION BC036016.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3021)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3021)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: a Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51477720.
FEATURES Location/Qualifiers
source 1..3021
/db_xref="H-InvDB:HIT000051584"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32951 IMAGE:5270970"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3021
/gene="TEX11"
/gene_synonym="TGC1"
/gene_synonym="TSGA3"
/db_xref="GeneID:56159"
/db_xref="HGNC:HGNC:11733"
/db_xref="MIM:300311"
CDS 86..2863
/gene="TEX11"
/gene_synonym="TGC1"
/gene_synonym="TSGA3"
/codon_start=1
/product="testis expressed 11"
/protein_id="AAH36016.2"
/db_xref="GeneID:56159"
/db_xref="HGNC:HGNC:11733"
/db_xref="MIM:300311"
/translation="MDNDDFFSMDFKEVVENLVTNDNSPNIPEAIDRLFSDIANINRE
SMAEITDIQIEEMAVNLWNWALTIGGGWLVNEEQKIRLHYVACKLLSMCEASFASEQS
IQRLIMMNMRIGKEWLDAGNFLIADECFQAAVASLEQLYVKLIQRSSPEADLTMEKIT
VESDHFRVLSYQAESAVAQGDFQRASMCVLQCKDMLMRLPQMTSSLHHLCYNFGVETQ
KNNKYEESSFWLSQSYDIGKMDKKSTGPEMLAKVLRLLATNYLDWDDTKYYDKALNAV
NLANKEHLSSPGLFLKMKILLKGETSNEELLEAVMEILHLDMPLDFCLNIAKLLMDHE
RESVGFHFLTIIHERFKSSENIGKVLILHTDMLLQRKEELLAKEKIEEIFLAHQTGRQ
LTAESMNWLHNILWRQAASSFEVQNYTDALQWYYYSLRFYSTDKMDLDFTKLQRNMAC
CYLNLQQLDKAKEAVAEAERHDPRNVFTQFYIFKIAVIEGNSERALQAIITLENILTD
EESEDNDLVAERGSPTMLLSLAAQFALENGQQIVAEKALEYLAQHSEDQEQVLTAVKC
LLRFLLPKIAEMPESEDKKKEMDRLLTCLNRAFVKLSQPFGEEALSLESRANEAQWFR
KTAWNLAVQCDKDPVMMREFFILSYKMSQFCPSDQVILIARKTCLLMAVAVDLEQGRK
ASTAFEQTMFLSRALEEIQTCNDIHNFLKQTGTFSNDSCEKLLLLYEFEVRAKLNDPL
LESFLESVWELPHLETKTFETIAIIAMEKPAHYPLIALKALKKALLLYKKEEPIDISQ
YSKCMHNLVNLSVPDGASNVELCPLEEVWGYFEDALSHISRTKDYPEMEILWLMVKSW
NTGVLMFSRSKYASAEKWCGLALRFLNHLTSFKESYETQMNMLYSQLVEALSNNKGPV
FHEHGYWSKSD"
BASE COUNT 957 a 543 c 674 g 847 t
ORIGIN
1 gtcctcgtgc gctgtggacg gaggttgtgg agagagcagg gcggcattgg tggctgcggc
61 tgaggcttga gccagagatt taaaaatgga caatgatgat tttttttcca tggactttaa
121 agaagttgtt gaaaacctgg ttacaaatga taattcacct aacataccag aggcaattga
181 tagactcttc agcgacatag caaatatcaa cagggagtct atggctgaaa taacagacat
241 tcagattgaa gaaatggcag taaacctatg gaactgggca cttaccatag gaggaggttg
301 gcttgtaaat gaagagcaga aaattagatt acattatgtt gcttgcaagt tgctgagtat
361 gtgtgaagcc tcatttgcct cagaacaaag tattcaacga ctgattatga tgaatatgag
421 aataggaaaa gaatggttgg atgctggaaa ttttctaatc gctgatgaat gttttcaagc
481 tgctgtggcc agtctggagc aattatacgt caaattaatt caaaggagct cccctgaggc
541 tgacttgacc atggagaaga ttactgttga gagtgaccac ttcagagtgc tttcttacca
601 agcagagtca gcagttgctc aaggggattt tcaaagagca tctatgtgtg tactgcaatg
661 taaagatatg ttgatgaggc tcccccagat gacttcaagt cttcatcatc tctgttacaa
721 ctttggagta gaaacccaga agaataataa atatgaagaa agttctttct ggcttagcca
781 aagctatgat attgggaaga tggataagaa atctactggg ccagaaatgc tggctaaagt
841 tctacggcta ttagccacga attatttgga ttgggatgac accaaatatt atgataaggc
901 tctcaatgct gtaaacctag caaacaagga acatttaagt tctcctgggc ttttcttaaa
961 aatgaaaatc ctcttgaaag gcgaaacatc taatgaagaa ctccttgaag ctgtcatgga
1021 aatactacat cttgacatgc ccttagactt ctgtctgaac attgctaaac tgctgatgga
1081 tcatgaaaga gaatctgttg ggtttcattt cctgacgatt attcatgaac gttttaagtc
1141 atcggaaaat attggaaaag ttctgatact ccatactgac atgcttttac aaaggaagga
1201 agaacttctt gccaaggaga agattgaaga aatcttttta gctcaccaaa caggaagaca
1261 actgacagca gaatcaatga actggttaca caacattctg tggagacaag ctgccagtag
1321 ttttgaggta caaaattaca ctgatgccct acaatggtac tattattctc tgaggtttta
1381 ttcaactgat aaaatggatc tggacttcac caagctgcag aggaacatgg cttgctgtta
1441 cctgaatttg caacaacttg ataaggccaa agaggcagtg gcagaagctg aacgacatga
1501 ccctaggaac gttttcactc aattttatat attcaagatt gcagtcatag agggcaactc
1561 tgaaagagct ttgcaggcaa taattacttt agagaatata ttaacagatg aagagtcaga
1621 agataatgat ctagttgcag agagaggttc acctaccatg cttctaagtt tagctgccca
1681 gtttgctcta gagaatggac aacaaattgt ggcagaaaaa gctttggaat atttagctca
1741 acattcagaa gaccaggaac aagttcttac agctgtaaag tgtttgcttc gttttcttct
1801 tccaaaaatt gctgaaatgc cggaatctga agataagaag aaagaaatgg atcgactttt
1861 gacttgcctg aatagagcct ttgtgaaact ttctcagcct tttggtgaag aagccttaag
1921 tttggagtca agagctaatg aagctcagtg gtttcgaaaa acagcttgga acttggctgt
1981 gcaatgtgac aaagatccag tgatgatgag agagtttttt atactttctt ataagatgtc
2041 ccagttttgt ccttctgatc aagtaattct gattgcacgg aaaacatgtt tacttatggc
2101 agttgcagtt gatctagagc aagggagaaa agcttcaaca gcttttgaac agaccatgtt
2161 cctgagtcgt gcacttgagg agatccagac atgcaatgac atccataatt tcctgaaaca
2221 aacagggacc ttctcaaatg attcatgtga gaaattgctt ctgctgtacg agtttgaagt
2281 tagagccaaa ttgaatgatc cattactgga aagcttcctg gaatcagtgt gggagttgcc
2341 tcatttagaa actaaaacat ttgaaacaat tgcaataata gcaatggaaa agcctgcaca
2401 ctatcctttg attgctctca aggccttgaa aaaggcttta ttgctctaca aaaaggaaga
2461 accaattgat atatcacaat acagcaaatg tatgcacaac ttggttaacc tctcagtgcc
2521 agatggggcg tcgaatgtag agctctgtcc cctggaagaa gtttggggct attttgaaga
2581 cgctctgagc cacattagcc gcactaaaga ctacccagaa atggagattc tctggctgat
2641 ggtcaagtcc tggaataccg gagtacttat gtttagcagg agcaagtatg catctgctga
2701 aaagtggtgt ggcctggcct tgcgtttcct taaccacctt acctccttca aggaaagcta
2761 tgaaactcag atgaatatgc tgtatagtca gcttgtggaa gcattgagta acaacaaggg
2821 cccagttttt catgaacatg gctactggag caagtcagat taggcaagct catggccaca
2881 tgaagaagat acattgtccc gagatgctga ctgtttaaat ttttgccaga gtttctcttg
2941 agcttttgtt tctgtttgct cagaccctgt tttcatgttg ttgaataaac tttctaaaat
3001 aaaagcaaaa aaaaaaaaaa a
//