LOCUS BC036012 3521 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens tripartite motif-containing 37, mRNA (cDNA clone
MGC:32900 IMAGE:5270430), complete cds.
ACCESSION BC036012
VERSION BC036012.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3521)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3521)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: a Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52487175.
FEATURES Location/Qualifiers
source 1..3521
/db_xref="H-InvDB:HIT000051580"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32900 IMAGE:5270430"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3521
/gene="TRIM37"
/gene_synonym="KIAA0898"
/gene_synonym="POB1"
/gene_synonym="TEF3"
/db_xref="GeneID:4591"
/db_xref="HGNC:HGNC:7523"
/db_xref="MIM:605073"
CDS 297..3191
/gene="TRIM37"
/gene_synonym="KIAA0898"
/gene_synonym="POB1"
/gene_synonym="TEF3"
/codon_start=1
/product="tripartite motif-containing 37"
/protein_id="AAH36012.1"
/db_xref="GeneID:4591"
/db_xref="HGNC:HGNC:7523"
/db_xref="MIM:605073"
/translation="MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWL
TEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKL
SVFCWACKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISL
VQEVERNVEAVRNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELL
ESLLQEVEHQLRSCSKSELISKSSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSY
DSATFVLENFSTLRQRADPVYSPPLQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAG
LPETSKYEYRVEMVHQSCNDPTKNIIREFASDFEVGECWGYNRFFRLDLLANEGYLNP
QNDTVILRFQVRSPTFFQKSRDQHWYITQLEAAQTSYIQQINNLKERLTIELSRTQKS
RDLSPPDNHLSPQNDDALETRAKKSACSDMLLEGGPTTASVREAKEDEEDEEKIQNED
YHHELSDGDLDLDLVYEDEVNQLDGSSSSASSTATSNTEENDIDEETMSGENDVEYNN
MELEEGELMEDAAAAGPAGSSHGYVGSSSRISRRTHLCSAATSSLLDIDPLILIHLLD
LKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQRKQQAMWRVPSDLKMLKRLKTQM
AEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAALAACGTENSGRLQDLGMELL
AKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDPGENSRSKGDCQTLSEGSP
GSSQSGSRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVVAVFSGLPAVEKRRKMV
TLGANAKGGHLEGLQMTDLENNSETGELQPVLPEGASAAPEEGMSSDSDIECDTENEE
QEEHTSVGGFHDSFMVMTQPPDEDTHSSFPDGEQIGPEDLSFNTDENSGR"
BASE COUNT 1083 a 699 c 886 g 853 t
ORIGIN
1 ggtcgaggtt ccggcgcggc tgctggccgg cggctgagcc gggagaaagg agctgcggcc
61 accgttcgcc ctgcttctgc gcctcggggc gggcgcgccg gtaaaaatgg cgaaatgggg
121 gtaggcggcg ctggacctga agagatgggg cgcgcaggtg gggcggttgt cagagccccc
181 tgacgtgggc gccgggcttt tatcggcgat ttgatctggc gacctcgggc cggcgcctaa
241 gaggtcagac tgcggagcct gcgggtcgcc agcggccccg ccgagagccg gaggcaatgg
301 atgaacagag cgtggagagc attgctgagg ttttccgatg tttcatttgt atggagaaat
361 tgcgggatgc acgcctgtgt cctcattgct ccaaactgtg ttgtttcagc tgtattaggc
421 gctggctgac agagcagaga gctcaatgtc ctcattgccg tgctccactc cagctacgag
481 aactagtaaa ttgtcgttgg gcagaagaag taacacaaca gcttgatact cttcaactct
541 gcagtctcac caaacatgaa gaaaatgaaa aggacaaatg tgaaaatcac catgaaaaac
601 ttagtgtatt ttgctgggct tgtaagaagt gtatctgcca tcagtgtgca ctttggggag
661 gaatgcatgg cggacatacc tttaaacctt tggcagaaat ttatgagcaa cacgtcacta
721 aagtgaatga agaggtagcc aaacttcgtc ggcgtctcat ggaactgatc agcttagttc
781 aagaagtgga aaggaatgta gaagctgtaa gaaatgcaaa agatgagcgt gttcgggaaa
841 ttaggaatgc agtggagatg atgattgcac ggttagacac acagctgaag aataagctta
901 taacactgat gggtcagaag acatctctaa cccaagaaac agagcttttg gaatccttac
961 ttcaggaggt ggagcaccag ttgcggtctt gtagtaagag tgagttgata tctaagagct
1021 cagagatcct tatgatgttt cagcaagttc atcggaagcc catggcatct tttgttacca
1081 ctcctgttcc accagacttt accagtgaat tagtgccatc ttacgattca gctacttttg
1141 ttttagagaa tttcagcact ttgcgtcaga gagcagatcc tgtttacagt ccacctcttc
1201 aagtttcagg actttgctgg aggttaaaag tttacccaga tggaaatgga gttgtgcgag
1261 gttactactt atctgtgttt ctggagctct cagctggctt gcctgaaact tctaaatatg
1321 aatatcgtgt agagatggtt caccagtcct gtaatgatcc tacaaaaaat atcattcgag
1381 aatttgcatc tgactttgaa gttggagaat gctggggcta taatagattt ttccgtttgg
1441 acttactcgc aaatgaagga tacttgaatc cacaaaatga tacagtgatt ttaaggtttc
1501 aggtacgttc accaactttc tttcaaaaat cccgggacca gcattggtac attactcagc
1561 tggaagctgc acagactagt tatatccaac aaataaacaa ccttaaagag agacttacta
1621 ttgagctgtc tcgaactcag aagtcaagag atttgtcacc accagataac catcttagcc
1681 cccaaaatga tgatgctctg gagacacgag ctaagaagtc tgcatgctct gacatgcttc
1741 tcgaaggtgg tcctactaca gcttctgtaa gagaggccaa agaggatgaa gaagatgagg
1801 agaagattca gaatgaagat tatcatcacg agctttcaga tggagatctg gatctggatc
1861 ttgtttatga ggatgaagta aatcagctcg atggcagcag ttcctctgct agttccacag
1921 caacaagtaa tacagaagaa aatgatattg atgaagaaac tatgtctgga gaaaatgatg
1981 tggaatataa caacatggaa ttagaagagg gagaactcat ggaagatgca gctgctgcag
2041 gacccgcagg tagtagccat ggttatgtgg gttccagtag tagaatatca agaagaacac
2101 atttatgctc cgctgctacc agtagtttac tagacattga tccattaatt ttaatacatt
2161 tgttggacct taaggaccgg agcagtatag aaaatttgtg gggcttacag cctcgcccac
2221 ctgcttcact tctgcagccc acagcatcat attctcgaaa agataaagac caaaggaagc
2281 aacaggcaat gtggcgagtg ccctctgatt taaagatgct aaaaagactc aaaactcaaa
2341 tggccgaagt tcgatgtatg aaaactgatg taaagaatac actttcagaa ataaaaagca
2401 gcagtgctgc ttctggagac atgcagacaa gccttttttc tgctgaccag gcagctctgg
2461 ctgcatgtgg aactgaaaac tctggcagat tgcaggattt gggaatggaa ctcctggcaa
2521 agtcatcagt tgccaattgt tacatacgaa actccacaaa taagaagagt aattcgccca
2581 agccagctcg atccagtgta gcaggtagtc tatcacttcg aagagcagtg gaccctggag
2641 aaaatagtcg ttcaaaggga gactgtcaga ctctgtctga aggctcccca ggaagctctc
2701 agtctgggag caggcacagt tctccccgag ccttgataca tggcagtatc ggtgatattc
2761 tgccaaaaac tgaagaccgg cagtgtaaag ctttggattc agatgctgtt gtggttgcag
2821 ttttcagtgg cttgcctgcg gttgagaaaa ggaggaaaat ggtcaccttg ggggctaatg
2881 ctaaaggagg tcatctggaa ggactgcaga tgactgattt ggaaaataat tctgaaactg
2941 gagagttaca gcctgtacta cctgaaggag cttcagctgc ccctgaagaa ggaatgagta
3001 gcgacagtga cattgaatgt gacactgaga atgaggagca ggaagagcat accagtgtgg
3061 gcgggtttca cgactccttc atggtcatga cacagccccc ggatgaagat acacattcca
3121 gttttcctga tggtgaacaa ataggccctg aagatctcag cttcaataca gatgaaaata
3181 gtggaagata atttgatttg aaactgacac tgcacctgat gggttaacaa gatctaggct
3241 tcagaaggtg acagatatga gtgaggacca tgtgtggggc aaagcctcag aatgatgaaa
3301 aggttccggc actatagttg gggccatgtt gactcctttt caaccatttg tcacagacgt
3361 gagaagaaga aatgacttca aaatcaagag aaaacaaata ctgaaagtct ctacttacat
3421 ccaaatttta aaaaataaaa tctgtagatt aacaatctaa aaaaaaaaaa aaaaaaaaaa
3481 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//