LOCUS BC035975 2176 bp mRNA linear HUM 26-JUN-2008
DEFINITION Homo sapiens uromodulin, mRNA (cDNA clone MGC:32619 IMAGE:4556427),
complete cds.
ACCESSION BC035975
VERSION BC035975.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2176)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2176)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: d Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56550048.
FEATURES Location/Qualifiers
source 1..2176
/db_xref="H-InvDB:HIT000051572"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32619 IMAGE:4556427"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2176
/gene="UMOD"
/gene_synonym="ADMCKD2"
/gene_synonym="FJHN"
/gene_synonym="HNFJ"
/gene_synonym="MCKD2"
/gene_synonym="THGP"
/gene_synonym="THP"
/db_xref="GeneID:7369"
/db_xref="HGNC:HGNC:12559"
/db_xref="MIM:191845"
CDS 66..1901
/gene="UMOD"
/gene_synonym="ADMCKD2"
/gene_synonym="FJHN"
/gene_synonym="HNFJ"
/gene_synonym="MCKD2"
/gene_synonym="THGP"
/gene_synonym="THP"
/codon_start=1
/product="UMOD protein"
/protein_id="AAH35975.1"
/db_xref="GeneID:7369"
/db_xref="HGNC:HGNC:12559"
/db_xref="MIM:191845"
/translation="MGQPSLTWMLMVVVASWFITTAATDTSEARWCSECHSNATCTED
EAVTTCTCQEGFTGDGLTCVDLDECAIPGAHNCSANSSCVNTPGSFSCVCPEGFRLSP
GLGCTDVDECAEPGLSHCHALATCVNVVGSYLCVCPAGYRGDGWHCECSPGSCGPGLD
CVPEGDALVCADPCQAHRTLDEYWRSTEYGEGYACDTDLRGWYRPHPSSDEGIVSRKA
CAHWSGHCCLWDASVQVKACAGGYYVYNLTAPPECHLAYCTDPSSVEGTCEECSIDED
CKSNNGRWHCQCKQDFNITDISLLEHRLECGANDMKVSLGKCQLKSLGFDKVFMYLSD
SRCSGFNDRDNRDWVSVVTPARDGPCGTVLTRNETHATYSNTLYLADEIIIRDLNIKI
NFACSYPLDMKVSLKTALQPMVSALNIRVGGTGMFTVRMALFQTPSYTQPYQGSSVTL
STEAFLYVGTMLDGGDLSRFALLMTNCYATPSSNATDPLKYFIIQDRCPHTRDSTIQV
VENGESSQGRFSVQMFRFAGNYDLVYLHCEVYLCDTMNEKCKPTCSGTRFRSGSVIDQ
SRVLNLGPITRKGVQATVSRAFSSLGLLKVWLPLLLSATLTLTFQ"
BASE COUNT 473 a 637 c 614 g 452 t
ORIGIN
1 gactaactct acctttctgg cttcaggtgc tatctagacc tgaagtagcg ggaagagcag
61 aaaggatggg gcagccatct ctgacttgga tgctgatggt ggtggtggcc tcttggttca
121 tcacaactgc agccactgac acctcagaag caagatggtg ctctgaatgt cacagcaatg
181 ccacctgcac ggaggatgag gccgttacga cgtgcacctg tcaggagggc ttcaccggcg
241 atggcctgac ctgcgtggac ctggatgagt gcgccattcc tggagctcac aactgctccg
301 ccaacagcag ctgcgtaaac acgccaggct ccttctcctg cgtctgcccc gaaggcttcc
361 gcctgtcgcc cggtctcggc tgcacagacg tggatgagtg cgctgagcct gggcttagcc
421 actgccacgc cctggccaca tgtgtcaatg tggtgggcag ctacttgtgc gtatgccccg
481 cgggctaccg gggggatgga tggcactgtg agtgctcccc gggctcctgc gggccggggt
541 tggactgcgt gcccgagggc gacgcgctcg tgtgcgcgga tccgtgtcag gcgcaccgca
601 ccctggacga gtactggcgc agcaccgagt acggggaggg ctacgcctgc gacacggacc
661 tgcgcggctg gtaccgcccc catccgtcca gcgacgaggg catcgtgagc cgcaaggcct
721 gcgcgcactg gagcggccac tgctgcctgt gggatgcgtc cgtccaggtg aaggcctgtg
781 ccggcggcta ctacgtctac aacctgacag cgccccccga gtgtcacctg gcgtactgca
841 cagaccccag ctccgtggag gggacgtgtg aggagtgcag tatagacgag gactgcaaat
901 cgaataatgg cagatggcac tgccagtgca aacaggactt caacatcact gatatctccc
961 tcctggagca caggctggaa tgtggggcca atgacatgaa ggtgtcgctg ggcaagtgcc
1021 agctgaagag tctgggcttc gacaaggtct tcatgtacct gagtgacagc cggtgctcgg
1081 gcttcaatga cagagacaac cgggactggg tgtctgtagt gaccccagcc cgggatggcc
1141 cctgtgggac agtgttgacg aggaatgaaa cccatgccac ttacagcaac accctctacc
1201 tggcagatga gatcatcatc cgtgacctca acatcaaaat caactttgca tgctcctacc
1261 ccctggacat gaaagtcagc ctgaagaccg ccctacagcc aatggtcagt gctctaaaca
1321 tcagagtggg cgggaccggc atgttcaccg tgcggatggc gctcttccag accccttcct
1381 acacgcagcc ctaccaaggc tcctccgtga cactgtccac tgaggctttt ctctacgtgg
1441 gcaccatgtt ggatgggggc gacctgtccc gatttgcact gctcatgacc aactgctatg
1501 ccacacccag tagcaatgcc acggaccccc tgaagtactt catcatccag gacagatgcc
1561 cacacactag agactcaact atccaagtgg tggagaatgg ggagtcctcc cagggccgat
1621 tttccgtcca gatgttccgg tttgctggaa actatgacct agtctacctg cactgtgaag
1681 tctatctctg tgacaccatg aatgaaaagt gcaagcctac ctgctctggg accagattcc
1741 gaagtgggag tgtcatagat caatcccgtg tcctgaactt gggtcccatc acacggaaag
1801 gtgtccaggc cacagtctca agggctttta gcagcttggg gctcctgaaa gtctggctgc
1861 ctctgcttct ctcggccacc ttgaccctga cttttcagtg actgacagcg gaaagccctg
1921 tgctccatgg ctgccatctc acctcctgct gggcaggggg catgatgcgg gccagtgctc
1981 cagccacaga aaagaaagtt catgctttgt tcagcctgcc ttcttttctc ccttttaatc
2041 ctggctgtcg agaaacagcc tgtgtcttta aatgctgctt tttctcaaaa tgggacttgt
2101 gacggtgtac ctgaggcccc catctcctta aagagtgtgg caaaataaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaa
//