LOCUS BC035973 2911 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens solute carrier family 22 (organic anion transporter),
member 13, mRNA (cDNA clone MGC:32613 IMAGE:4609915), complete cds.
ACCESSION BC035973
VERSION BC035973.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2911)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2911)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: f Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758851
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..2911
/db_xref="H-InvDB:HIT000051570"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32613 IMAGE:4609915"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2911
/gene="SLC22A13"
/gene_synonym="OAT10"
/gene_synonym="OCTL1"
/gene_synonym="OCTL3"
/gene_synonym="ORCTL-3"
/db_xref="GeneID:9390"
/db_xref="HGNC:HGNC:8494"
/db_xref="MIM:604047"
CDS 50..1456
/gene="SLC22A13"
/gene_synonym="OAT10"
/gene_synonym="OCTL1"
/gene_synonym="OCTL3"
/gene_synonym="ORCTL-3"
/codon_start=1
/product="SLC22A13 protein"
/protein_id="AAH35973.1"
/db_xref="GeneID:9390"
/db_xref="HGNC:HGNC:8494"
/db_xref="MIM:604047"
/translation="MAQFVQVLAEIGDFGRFQIQLLILLCVLNFLSPFYFFAHVFMIL
DEPHHCAVAWVKNHTFNLSAAEQLVLSVPLDTAGHPEPCLMFRPPPANASLQDILSHR
FNETQPCDMGWEYPENRLPSLKNEFNLVCDRKHLKDTTQSVFMAGLLVGTLMFGPLCD
RIGRKATILAQLLLFTLIGLATAFVPSFELYMALRFAVATAVAGLSFSNVTLLTEWVG
PSWRTQAVVLAQCNFSLGQMVLAGLAYGFRNWRLLQITGTAPGLLLFFYFWALPESAR
WLLTRGRMDEAIQLIQKAASVNRRKLSPELMNQLVPEKTGPSGNALDLFRHPQLRKVT
LIIFCVWFVDSLGYYGLSLQVGDFGLDVYLTQLIFGAVEVPARCSSIFMMQRFGRKWS
QLGTLVLGGLMCIIIIFIPADLPVVVTMLAVVGKMATAAAFTISYVYSAEFFPTILRQ
AWGWWASSHGSGASSHHL"
BASE COUNT 603 a 858 c 763 g 687 t
ORIGIN
1 acagagctac cctagtgtcc ccaggctgag gaggtagtga ctggcataca tggctcagtt
61 tgtccaggtc ctggctgaaa taggtgactt tggtcgcttc cagatacagc tattgatcct
121 gctgtgtgtt ctcaacttcc tgtctccctt ctactttttt gcccatgtct tcatgatcct
181 agatgagccc caccactgtg cagtggcttg ggtgaagaac cacactttca acctgagtgc
241 tgctgaacag ctggtactga gcgtgcccct ggacactgca ggtcacccag agccctgcct
301 catgttccgg ccaccccccg ccaatgccag cctgcaggac atcctcagcc accgcttcaa
361 tgagacgcag ccttgtgata tgggctggga atatcctgag aacaggctcc catccctgaa
421 gaatgagttc aacctggttt gtgatcggaa gcacctgaag gacaccacac agtcagtgtt
481 catggctggg ctccttgttg gcaccctcat gtttgggccc ctctgcgacc ggattggccg
541 caaggccaca atcctggcgc agctgctcct cttcaccctc atcggcctgg ccacagcttt
601 tgtgcccagc tttgagctct acatggccct gcgctttgct gtggctactg ccgtcgctgg
661 acttagcttc agcaatgtca ccctactgac agaatgggtg gggccctcat ggaggacgca
721 ggccgtggtc ctggcccagt gcaacttctc cctcgggcag atggtgcttg cgggactcgc
781 ctacggtttc cgcaactgga ggctccttca gatcaccggc actgcgcctg gcttactgct
841 cttcttctac ttctgggctc tgccagaatc tgcacgttgg ctcctgaccc gtgggaggat
901 ggacgaggcg atacaactga tccagaaggc ggcctcggtc aataggcgga aactctcccc
961 ggagctcatg aaccagctgg tcccagagaa gacaggcccc tcagggaatg ccctggatct
1021 gttcagacac ccccagctcc ggaaggtgac cctgattatc ttctgtgtct ggtttgtgga
1081 cagtctgggg tactacggcc tgagcctcca agtgggggac ttcggcctgg acgtctatct
1141 gacgcagctc atctttggag ctgttgaggt gcctgcccgc tgttccagca tcttcatgat
1201 gcagaggttt ggccgcaagt ggagccagtt ggggaccttg gtcttgggtg gcctgatgtg
1261 tatcatcatc atcttcatcc cagcagatct gcccgtggtg gtcaccatgc tggctgtggt
1321 ggggaagatg gccacagctg ctgcctttac catctcctat gtgtactctg ccgagttttt
1381 ccccaccatc ctccgacagg catggggctg gtgggcatct tctcacggat cgggggcatc
1441 ctcacaccac ttgtgatcct gctgggagag taccacgctg ccctccccat gctcatcgtg
1501 gccggcctgc tgtgcaccct gctgccagag acgcatggcc agggcctgaa agacaccctc
1561 caggacctgg agctggggcc tcacccacgg tcccccaaat cagtgccctc agagaaggaa
1621 acagaggcca agggaagaac ttccagcccg ggagtggcct ttgtgagcag cacatacttc
1681 tgattgaggt ctctaagagc tggaccatca gcagcaggga gctgcctaaa cacctccttg
1741 gatatggcca ggacccacag ggacacaggg caagaccagc cttgcttatg gaggcaggac
1801 accacaatct ggcccatggc tgtcacctcc tgccgagtcc aatcccagac tgggaaccac
1861 catctgagac aggacctccc ggcctccttc acctttctca tctccagagc cctgccccca
1921 atactctgtc tgggttagga tcttgggtat gtcttggaat taacttgtcc tctaacaatc
1981 ttcatggggt atggctctct tgatctcctc aatctggagt cccctgccct caaaacacag
2041 tgatgttcag aacagaacac aaggtaagcc ctttccaatt tgtgggaaca ggaggggaga
2101 ggaaacaaat gtgaagttgt ggactctacc caggcaggtg gatgaaaatg ctgtggataa
2161 aaggaaggtt atgattcctt ctagcggatg gaccagattc ctctggctaa cgtatggccc
2221 cataggtcac tgggtcatac agagagaaga ttcagttcag cctaaatcaa aacttccacc
2281 ttgtgttcac ttcaaagatg gcccaacccc cgccctacac tcagctcatg cctaacctat
2341 gtgtggctca gggaccagct tggggaagga aaggaggttt gttctgctcc ccgcctcacc
2401 ccgcctcctc ctgctcatgc tcagctgctt ctggaccttc cagggcccat gcagggtgag
2461 ggaaagggta gaggtctttt caccgagctg ctgctggttg cagttctttc tggtgcacat
2521 tggctaatgc cagttggtgt gttttgtcag gcttctgaaa gctgcctttt ccacgggcca
2581 tcttcttggg cttctcagag atcttctcag gccttggtat tgttccttag aatgagcaat
2641 atgctcccaa tgcactccca gctcctcttg ggacccttct ccagccccac ccagcattgc
2701 tcctacaacc tgtcctacag ctggcagccc ctgacccaac caagatggcc ttcttggctg
2761 ggcgtggtgg ttcatgcctg taatcccagc actttgggag gctgaggcgg gcggattacc
2821 tgaggtcagg aatttgagac cagcctggct ggcatggcaa aaccctgtct ctactaaaaa
2881 tacaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//