LOCUS BC035940 2964 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens phytanoyl-CoA 2-hydroxylase interacting protein, mRNA
(cDNA clone MGC:27122 IMAGE:4793228), complete cds.
ACCESSION BC035940
VERSION BC035940.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2964)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2964)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: b Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281475.
FEATURES Location/Qualifiers
source 1..2964
/db_xref="H-InvDB:HIT000051558"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:27122 IMAGE:4793228"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2964
/gene="PHYHIP"
/gene_synonym="KIAA0273"
/gene_synonym="PAHX-AP"
/db_xref="GeneID:9796"
/db_xref="HGNC:HGNC:16865"
/db_xref="MIM:608511"
CDS 326..1318
/gene="PHYHIP"
/gene_synonym="KIAA0273"
/gene_synonym="PAHX-AP"
/codon_start=1
/product="phytanoyl-CoA 2-hydroxylase interacting protein"
/protein_id="AAH35940.1"
/db_xref="GeneID:9796"
/db_xref="HGNC:HGNC:16865"
/db_xref="MIM:608511"
/translation="MELLSTPHSIEINNITCDSFSISWAMEDSDLERVTHYFIDLNKK
ENKNSNKFKHRDVPTKLVAKAVPLPMTVRGHWFLSPRTEYSVAVQTAVKQSDGEYLVS
GWSETVEFCTGDYAKEHLAQLQEKAEQIAGRMLRFSVFYRNHHKEYFEHARTHCGNML
QPYLKDNSGSHGSPTSGMLHGVFFSCNTEFNTGQPPQDSPYGRWRFQIPAQRLFNPST
NLYFADFYCMYTAYHYAILVLAPKGSMGDRFCRDRRPLLDIACNKFLTCSVEDGELVF
RHAQDLILEIIYTEPVDLSLGTLGEISGHQLMSLSTADAKKDPSCKTCNISVGR"
BASE COUNT 547 a 964 c 852 g 601 t
ORIGIN
1 cttctctgcc tctctctcct ccacgctgct ttgatttcgc tcttgcctct cttcttgcgc
61 tgctcagctg ggaacatcgg ctcaccaggg gcagcagcga cgcgctgcac agccagacag
121 gagctggttg cggggcatgg aagcagcctc cttggcagcc gggagaggag caagcgcacg
181 ccactgcccg tgacccaggc gtccggctgc tgtcccctgc cggggagctc atccacgcag
241 aggtctctcc ctgtcctccc tgcgagcttt tcctctgcag agcccagtgg agccagtccc
301 cacaggagac aaccctgacg ggagcatgga gctgctgtcc acgccccaca gcattgagat
361 caacaacatc acctgcgact ccttcagcat ctcctgggcc atggaggaca gtgacctgga
421 gagggtcacc cattacttca ttgaccttaa caagaaggag aataagaatt ccaacaagtt
481 caagcaccgg gacgtcccca ccaagctcgt ggccaaggca gtgccgctgc ccatgacggt
541 gagaggccac tggttcctga gcccccgcac ggagtacagt gtggccgtgc agacggcagt
601 gaagcagagc gatggggagt acctggtgtc cggctggagc gagacggtgg agttctgcac
661 tggggattat gccaaggagc acctggctca gcttcaggag aaagctgagc agatcgcagg
721 ccgcatgctc cgcttctccg tcttctaccg caaccatcac aaggagtact tcgagcatgc
781 caggacccac tgcgggaaca tgctgcagcc ttacctgaag gacaacagcg gcagccacgg
841 ctcccccacc agcggtatgc tccacggggt cttcttcagc tgcaacacgg agttcaacac
901 gggccagccc ccgcaggact ccccctacgg ccgctggcgc ttccagatcc cagctcagcg
961 cctcttcaat cccagcacca acctctactt tgcggacttc tactgcatgt acacggccta
1021 ccactacgcc atcctggtgc tggcgcccaa aggctccatg ggggaccgct tctgccgcga
1081 ccgccggccc ctcctggaca ttgcttgcaa caagttcctg acctgcagcg tggaggatgg
1141 ggagctggtc ttccgccacg cccaggacct catcctggag atcatctaca ctgagcccgt
1201 cgacctgtcc ctgggcaccc tgggggagat cagtgggcac cagctcatga gtctgtctac
1261 tgccgatgcc aagaaggacc ccagctgcaa gacctgcaac atcagcgtgg gccgctaggg
1321 actcctgggg agctgggggg cgagggagag atgagcggaa ggtggaggtg ggtagcccag
1381 gttcagggag ctggctttct ctctcctgcc cccctgctcc ctccactctg cccagctgcc
1441 ctcccctcgc cccttggcat tggaggcaac agacggtggt cctcttggta agtgtggccc
1501 acacccagcc tggtggacat ggaaaggctt ctcagcctct gtagttggca gctgggctgg
1561 acttctggag aacttcccct ttcctctggt ttccttgtcc tactgttctt tgcctcgtcc
1621 aggtctctat ctcccaaaga cctgcccacc tcctgggctc tcccagggaa gcccctctgg
1681 gccaaagccc atgggtagct tggctgcctc cagaagagat gcagagagct gtggggcgat
1741 ctttcttagt cccactcacc ccactcaggg ccaaccacag aatgccccct ccctgctgag
1801 ctgggtctct ggggcttccc actccaggcc tggatccctt ccttctataa atagtctcct
1861 gcaccaccgt gactccctgg ctgctccttg ccccaaagaa ccctcttcct gcatgggaga
1921 gctgtccctc cttctcaacc tgcccaccgg gacactcccc ctgctctcta gaaaggaact
1981 ctctttcttc tcttggcact gggggcgtca ggctgtcgga tgttccttcc ttccataccc
2041 cagcatacct tctccttgct tagagtgcag gggtctgaga cagcagccac tggggttgag
2101 gagggggagg agacccctga gacccagagg tgccccttcc tcagctggga gtgggccgcc
2161 tcatgctctg ctggggcctg gcatggaacg tgagacctgt aagctgtccc gcgggccccg
2221 gcaccccgcc cagctgtgca ctttgctcac tcgctctgcc atggtgccat gactgtactg
2281 tgcccatgcg tgacctggac tgtggaccct ctgctgctcc gcctctcccc tccccactgg
2341 ctctgtctgc tctcctgcca ccctgctggc ggggagcccc tccccgggga gttcttggtg
2401 aagtccttcc cgggcctcct tgtgtttttg cctcattcct actgtcacac aggtcacgag
2461 ggtggactcc ctacaatcaa caaagcaaac agagagcctg tgggaggggc tgacagcagc
2521 aggcggctgt ttgggggatg atggaggtga catcaggcag aggagagtgc agcctcacag
2581 tgactttctc agaggtgaca gagatgatgg atgagcagct ggattttcgt gatgaaggac
2641 ggaagcagca gcgggccggc aaggccatac ctcggtgagg gacaggtgga caacggtcac
2701 ctatctgtag ccaggggcag ttgtgtggcc agctgtctct ctgggatgag tcaggaggcc
2761 tggaggcttg gggagaggtg tggagaagga gagaacatgg cccaggcact ttccttcacc
2821 ctgtgctgac agcattgctg tgggggtggc ccactgccct cccctggccc tcatgtcccc
2881 ccggggctgg ggtccgcctg cctgtgctgt gcttgcgacg tgcatcaata aaccaccatg
2941 gcctgaggaa aaaaaaaaaa aaaa
//