LOCUS BC035857 1715 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peroxiredoxin 6, mRNA (cDNA clone MGC:46173
IMAGE:5767682), complete cds.
ACCESSION BC035857
VERSION BC035857.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1715)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1715)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: p Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28559000.
FEATURES Location/Qualifiers
source 1..1715
/db_xref="H-InvDB:HIT000051535"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46173 IMAGE:5767682"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1715
/gene="PRDX6"
/gene_synonym="1-Cys"
/gene_synonym="aiPLA2"
/gene_synonym="AOP2"
/gene_synonym="KIAA0106"
/gene_synonym="MGC46173"
/gene_synonym="NSGPx"
/gene_synonym="p29"
/gene_synonym="PRX"
/db_xref="GeneID:9588"
/db_xref="HGNC:HGNC:16753"
/db_xref="MIM:602316"
CDS 52..726
/gene="PRDX6"
/gene_synonym="1-Cys"
/gene_synonym="aiPLA2"
/gene_synonym="AOP2"
/gene_synonym="KIAA0106"
/gene_synonym="MGC46173"
/gene_synonym="NSGPx"
/gene_synonym="p29"
/gene_synonym="PRX"
/codon_start=1
/product="peroxiredoxin 6"
/protein_id="AAH35857.1"
/db_xref="GeneID:9588"
/db_xref="HGNC:HGNC:16753"
/db_xref="MIM:602316"
/translation="MPGGLLLGDVAPNFEANTTVGRIRFHDFLGDSWGILFSHPRDFT
PVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNCEEPTEKLPFPI
IDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEI
LRVVISLQLTAEKRVATPVDWKDGDSVMVLPTIPEEEAKKLFPKGVFTKELPSGKKYL
RYTPQP"
BASE COUNT 496 a 369 c 363 g 487 t
ORIGIN
1 gaaccaaccg gttgcttgct gtcccagcgg cgccccctca tcaccgtcgc catgcccgga
61 ggtctgcttc tcggggacgt ggctcccaac tttgaggcca ataccaccgt cggccgcatc
121 cgtttccacg actttctggg agactcatgg ggcattctct tctcccaccc tcgggacttt
181 accccagtgt gcaccacaga gcttggcaga gctgcaaagc tggcaccaga atttgccaag
241 aggaatgtta agttgattgc cctttcaata gacagtgttg aggaccatct tgcctggagc
301 aaggatatca atgcttacaa ttgtgaagag cccacagaaa agttaccttt tcccatcatc
361 gatgatagga atcgggagct tgccatcctg ttgggcatgc tggatccagc agagaaggat
421 gaaaagggca tgcctgtgac agctcgtgtg gtgtttgttt ttggtcctga taagaagctg
481 aagctgtcta tcctctaccc agctaccact ggcaggaact ttgatgagat tctcagggta
541 gtcatctctc tccagctgac agcagaaaaa agggttgcca ccccagttga ttggaaggat
601 ggggatagtg tgatggtcct tccaaccatc cctgaagaag aagccaaaaa acttttcccg
661 aaaggagtct tcaccaaaga gctcccatct ggcaagaaat acctccgcta cacaccccag
721 ccttaagtct cttggagaag ttggtgctgt gagccagagg atgtcagctg ccaattgtgt
781 tttcctgcag caattccata aacacatcct ggtgtcatca cagccaaggt ttttaggttg
841 ctataccaat ggcttattaa atgaaaatgg cactaaaagt ttcttgagat tctttatact
901 ctctgccttc agcaatcaat tccattcata catcagcact ctgctggttc tgtttgaaat
961 atgttctgta tttaaaactc aaatcttgtt ggatctctgc agggcttgtg accaatgaag
1021 tcatatttgt tgatggttga caaagcttgc ttcactccat cagagaatga ctatcaattt
1081 ttttttaact gtcctatcac gtcctctcct gtcacccatt ttgaagagtg gcagaacttg
1141 aagttcaact tcctctgtaa atatccaagt ataaagccca ggaacttcta gaataaccca
1201 gatgcgcttt aatttttttt aatatgtttt gatcacagaa cttctagaat aacccagatg
1261 ctctttcata ttcttttaat acatcttgat cacagctggg ggaaaaaaag ctttttaatt
1321 ctgtaccttc ctagtagata agtgaagagc agggaaagag acctttaaat attttgctat
1381 aaaaaaattt gtgataagtt tctatcaaaa tggggagatt gcagaaaagg cttcccttgg
1441 ctcccaagga ggtgtagcag gtgtgagcaa tattagtgcc atgtgccttt cacacagggt
1501 ttgcatttat cagtctgttt tccgatgatg tgtacatgaa agagtacacc atgtgaagag
1561 aagagagaat gattgaaaat gttttagtat agaactcttc ttgcagtggg ttgctatttt
1621 ctagatttta ctttttaggg aacaaaataa aatcctttgt taaaactggg aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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