LOCUS BC035840 962 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens gap junction protein, gamma 2, 47kDa, mRNA (cDNA clone
IMAGE:5734498), partial cds.
ACCESSION BC035840
VERSION BC035840.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 962)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 962)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: j Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45439366.
FEATURES Location/Qualifiers
source 1..962
/db_xref="H-InvDB:HIT000094119"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5734498"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>962
/gene="GJC2"
/gene_synonym="CX46.6"
/gene_synonym="Cx47"
/gene_synonym="PMLDAR"
/db_xref="GeneID:57165"
/db_xref="HGNC:HGNC:17494"
/db_xref="MIM:608803"
CDS 77..>962
/gene="GJC2"
/gene_synonym="CX46.6"
/gene_synonym="Cx47"
/gene_synonym="PMLDAR"
/codon_start=1
/product="GJC2 protein"
/protein_id="AAH35840.1"
/db_xref="GeneID:57165"
/db_xref="HGNC:HGNC:17494"
/db_xref="MIM:608803"
/translation="MSWSFLTRLLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIY
SDEQAKFTCNTRQPGCDNVCYDAFAPLSHVRFWVFQIVVISTPSVMYLGYAVHRLARA
SEQERRRALRRRPGPRRAPRAHLPPPHAGWPEPADLGEEEPMLGLGEEEEEEETGAAE
GAGEEAEEAGAEEACTKAVGADGKAAGTPGPTGQHDGRRRIQREGLMRVYVAQLVARA
AFEVAFLVGQYLLYGFEVRPFFPCSRQPCPHVVDCFVSRPTEKTVFLLVMYVVSCLCL
LLNLCEMAHLGLGSAQDAV"
BASE COUNT 141 a 314 c 352 g 155 t
ORIGIN
1 caggtggaag ggctctgagg gagactggaa ttttctggcc tggagaagga cccgcccgcc
61 cgcccctatg accaacatga gctggagctt cctgacgcgg ctgctggagg agatccacaa
121 ccactccacc ttcgtgggca aggtgtggct cacggtgctg gtggtcttcc gcatcgtgct
181 gacggctgtg ggcggcgagg ccatctactc ggacgagcag gccaagttca cttgcaacac
241 gcggcagcca ggctgcgaca acgtctgcta tgacgccttc gcgcccctgt cgcacgtgcg
301 cttctgggtc ttccagattg tggtcatctc cacgccctcg gtcatgtacc tgggctacgc
361 cgtgcaccgc ctggcccgtg cgtctgagca ggagcggcgc cgcgccctcc gccgccgccc
421 ggggccacgc cgcgcgcccc gagcgcacct gccgcccccg cacgccggct ggcctgagcc
481 cgccgacctg ggcgaggagg agcccatgct gggcctgggc gaggaggagg aggaggagga
541 gacgggggca gccgagggcg ccggcgagga agcggaggag gcaggcgcgg aggaggcgtg
601 cactaaggcg gtcggcgctg acggcaaggc ggcagggacc ccgggcccga ccgggcaaca
661 cgatgggcgg aggcgcatcc agcgggaggg cctgatgcgc gtgtacgtgg cccagctggt
721 ggccagggca gctttcgagg tggccttcct ggtgggccag tacctgctgt acggcttcga
781 ggtgcgaccg ttctttccct gcagccgcca gccctgcccg cacgtggtgg actgcttcgt
841 gtcgcgccct actgaaaaga cggtcttcct gctggttatg tacgtggtca gctgcctgtg
901 cctgctgctc aacctctgtg agatggccca cctgggcttg ggcagcgcgc aggacgcggt
961 gc
//