LOCUS BC035836 1377 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens asparaginase homolog (S. cerevisiae), mRNA (cDNA clone
IMAGE:5589106), partial cds.
ACCESSION BC035836
VERSION BC035836.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1377)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1377)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: f Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1377
/db_xref="H-InvDB:HIT000094118"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5589106"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>1377
/gene="ASPG"
/db_xref="GeneID:374569"
/db_xref="HGNC:HGNC:20123"
CDS 61..>1377
/gene="ASPG"
/codon_start=1
/product="ASPG protein"
/protein_id="AAH35836.1"
/db_xref="GeneID:374569"
/db_xref="HGNC:HGNC:20123"
/translation="MARAVGPERRLLAVYTGGTIGMRSELGVLVPGTGLAAILRTLPM
FHDEEHARARGLSEDTLVLPPASRNQRILYTVLECQPLFDSSDMTIAEWVCLAQTIKR
HYEQYHGFVVIHGTDTMAFAASMLSFMLENLQKTVILTGAQVPIHALWSDGRENLLGA
LLMAGQYVIPEVCLFFQNQLFRGNRATKVDARRFAAFCSPNLLPLATVGADITINREL
VRKVDGKAGLVVHSSMEQDVGLLRLYPGIPAALVRAFLQPPLKGVVMETFGSGNGPTK
PDLLQELRVATERGLVIVNCTHCLQGAVTTDYAAGMAMAGAGVISGFDMTSEAALAKL
SYVLGQPGLSLDVRKELLTKDLRGEMTPPSVEERRPSLQGNTLGGGVSWLLSLSGSQE
ADALRNALVPSLACAAAHAGDVEALQALVELGSDLGLVDFNGQTPLH"
BASE COUNT 225 a 453 c 453 g 246 t
ORIGIN
1 cccgcaggcc ctgcgtcccc gctgcacacc cccgtccact cccgtggtcc ccggtccggc
61 atggcgcgcg cggtggggcc cgagcggagg ctgctggccg tctacaccgg cggcaccatt
121 ggcatgcgga gtgagctcgg cgtgcttgtg cccgggacgg gcctggctgc catcctgagg
181 acactgccca tgttccatga cgaggagcac gcccgagccc gcggcctctc tgaggacacc
241 ctggtgctac ccccggccag ccgcaaccag aggattctct acaccgtgct ggagtgccag
301 cccctcttcg actccagtga catgaccatc gctgagtggg tttgccttgc ccagaccatc
361 aagaggcact acgagcagta ccacggcttt gtggtcatcc acggcaccga caccatggcc
421 tttgctgcct cgatgctgtc cttcatgctg gagaacctgc agaagactgt catcctcact
481 ggggcccagg tgcccatcca tgccctgtgg agcgacggcc gtgagaacct gctgggggca
541 ctgctcatgg ctggccagta tgtgatccca gaggtctgcc ttttcttcca gaatcagctg
601 tttcggggca accgggcaac caaggtagac gctcggaggt tcgcagcttt ctgctccccg
661 aacctgctgc ctctggccac agtgggtgct gacatcacaa tcaacaggga gctggtgcgg
721 aaggtggacg ggaaggctgg gctggtggtg cacagcagca tggagcagga cgtgggcctg
781 ctgcgcctct accctgggat ccctgccgcc ctggttcggg ccttcttgca gcctcccctg
841 aagggcgtgg tcatggagac cttcggttca gggaacggac ccaccaagcc cgacctgctg
901 caggagctgc gggtggccac cgagcgcggc ctggtcatcg tcaactgtac ccactgcctc
961 cagggggctg tgaccacaga ctatgcagct ggcatggcca tggcgggagc cggcgtcatc
1021 tcaggcttcg acatgacatc ggaggccgcc ctggccaagc tatcgtatgt gctgggccag
1081 ccagggctga gcctggatgt caggaaggag ctgctgacca aggaccttcg gggggagatg
1141 acgccaccct cggtggaaga gcgccggccc tcactgcagg gcaacacgct gggcggtggg
1201 gtctcctggc tcctcagtct gagcggcagc caggaggcag atgccctgcg gaatgccctg
1261 gtgcccagcc tggcctgtgc tgctgcccac gccggtgacg tggaggcgct gcaggcgctt
1321 gtggagctgg gcagtgacct gggcctggtg gactttaacg gccaaacccc actgcac
//