LOCUS BC035810 2330 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens glycosylphosphatidylinositol anchored high density
lipoprotein binding protein 1, mRNA (cDNA clone MGC:46287
IMAGE:5754421), complete cds.
ACCESSION BC035810
VERSION BC035810.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2330)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2330)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: n Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31342336.
FEATURES Location/Qualifiers
source 1..2330
/db_xref="H-InvDB:HIT000094099"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46287 IMAGE:5754421"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2330
/gene="GPIHBP1"
/gene_synonym="GPI-HBP1"
/db_xref="GeneID:338328"
/db_xref="HGNC:HGNC:24945"
CDS 76..630
/gene="GPIHBP1"
/gene_synonym="GPI-HBP1"
/codon_start=1
/product="glycosylphosphatidylinositol anchored high
density lipoprotein binding protein 1"
/protein_id="AAH35810.2"
/db_xref="GeneID:338328"
/db_xref="HGNC:HGNC:24945"
/translation="MKALGAVLLALLLCGRPGRGQTQQEEEEEDEDHGPDDYDEEDED
EVEEEETNRLPGGRSRVLLRCYTCKSLPRDERCNLTQNCSHGQTCTTLIAHGNTESGL
LTTHSTWCTDSCQPITKTVEGTQVTMTCCQSSLCNVPPWQSSRVQDPTGKGAGGPRGS
SETVGAALLLNLLAGLGAMGARRP"
BASE COUNT 501 a 686 c 741 g 402 t
ORIGIN
1 ccttcatccc acttaccgca gctccagagc cctgcgggag gactcagagt cagggacaca
61 gcagcgtccg gcgagatgaa ggcgctcggg gctgtcctgc ttgccctctt gctgtgcggg
121 cggccaggga gagggcagac acagcaggag gaagaggaag aggacgagga ccacgggcca
181 gatgactacg acgaggaaga tgaggatgag gttgaagagg aggagaccaa caggctccct
241 ggtggcagga gcagagtgct gctgcggtgc tacacctgca agtccctgcc cagggacgag
301 cgctgcaacc tgacgcagaa ctgctcacat ggccagacct gcacaaccct cattgcccac
361 gggaacaccg agtcaggcct cctgaccacc cactccacgt ggtgcacaga cagctgccag
421 cccatcacca agacggtgga ggggacccag gtgaccatga cctgctgcca gtccagcctg
481 tgcaatgtcc caccctggca aagctcccga gtccaggacc caacaggcaa gggggcaggc
541 ggcccccggg gcagctccga aactgtgggc gcagccctcc tgctcaacct ccttgccggc
601 cttggagcaa tgggggccag gagaccctga cccacggccc ctccccaccc ccacccggct
661 cacccccggc cctgccagca ctctgtctgg taccttcccc tcctgcccct gcaccagctt
721 tggagaatgg atttggagtg tcttgggcga tccagccagc gcaggccccc cggcccggtt
781 gcttcctcag ttcccggctg tgtccttggt gtcctttctc caccacctgt gagcagcaag
841 actgccgcac gtgggcgctg ggtccagacc tcggctgcca cgccccagga cctgcagccc
901 tcacgggggc tggggatccc catcagcaca gccaggcaga gatgataccc accacacacc
961 tgggggcccc cacacccagt cctcaccctt aacttctgcc atgggaattc ctccatctgc
1021 agcggtcaca cgggcccacc ctgcccttcc ccaggtcggc ctctccgctg tctggaggga
1081 aggggatttg gagggaggct gtcgtcgccc ccaggaaaga cgggcctggg ggaggcggga
1141 cagtgggaga ggcgcgctga ggatgagagg gcacagggag gtgggttggg gtgaggccac
1201 atgcggaggg gcggggcggg ggggggctgg ggggacaggc accaagtatg aagaggatgg
1261 ggccagcggg gcctgtctgg ctatggcgtg agcaccgcta tgggagaccc tggcttggaa
1321 agtgaacttg cagccttgga tggggaaggg ccagatgctg ggtgggtgcc tgtcaccttg
1381 aggtgaccat ctagggtcag tacctgctgg gcttaggaca gcgcctgagg ctgggaatac
1441 ctgtctctgc tctagcagag gctaaagcag gctagagcag tggaggggtg gagttgatga
1501 aaggagagga gtagatgaga tggaattttt ccagcctcat cctggcctgc cctctagact
1561 ccagtcccca agccctcagc ctagtgggtg tcatggatgg atctgggggt gtcagacagg
1621 ctaccctgtg ccagggaggg ggcagaatgg gcctgcagct tcctgcagag gaagcaggac
1681 tgggtagcag agccgggaag gtgggtggcc cattacaggg gggtccccag ggtgtcctct
1741 ggcagggctg tgactgctgc aagctctgcc ttcaccagta gctggtgcca ggacagagct
1801 ctgggacagc aggcagaggc cgagcctggg ccacagctca gccactgact tgggtatcag
1861 tttccccttc tgagaagtac agagtgagac ttaaagaacc cctagatccc caccagttca
1921 acactccatt aactgggaag cccagagtcc tgtccggcct gccaagttca tcctggtgga
1981 cagcgggagg cctccgctaa ctgttctctt cttttcctta ttaataaaac acacaatgcc
2041 tagctggggg gtcggaaggc aaatgcccta gatggtgggg tcacgtcttt ctccttctcc
2101 ttcctccttc tgctggctga agtgatgact ggagctcagc aaccactttg caccatgagg
2161 cagcactgag cacggtaggg cagcctggtg agaggggcct agctcgctgc cgacagaagt
2221 cactgcctac ctcagggtcc ccttacctgg gtgggaaata aatttctgct gtgttgaagc
2281 taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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