LOCUS BC035809 2180 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens sialic acid binding Ig-like lectin 12, mRNA (cDNA
clone MGC:46240 IMAGE:5755526), complete cds.
ACCESSION BC035809
VERSION BC035809.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2180)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2180)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: n Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24497436.
FEATURES Location/Qualifiers
source 1..2180
/db_xref="H-InvDB:HIT000051518"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46240 IMAGE:5755526"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2180
/gene="SIGLEC12"
/gene_synonym="FLJ38600"
/gene_synonym="S2V"
/gene_synonym="Siglec-12"
/gene_synonym="Siglec-L1"
/gene_synonym="Siglec-XII"
/gene_synonym="SLG"
/db_xref="GeneID:89858"
/db_xref="HGNC:HGNC:15482"
/db_xref="MIM:606094"
CDS 54..1841
/gene="SIGLEC12"
/gene_synonym="FLJ38600"
/gene_synonym="S2V"
/gene_synonym="Siglec-12"
/gene_synonym="Siglec-L1"
/gene_synonym="Siglec-XII"
/gene_synonym="SLG"
/codon_start=1
/product="sialic acid binding Ig-like lectin 12"
/protein_id="AAH35809.2"
/db_xref="GeneID:89858"
/db_xref="HGNC:HGNC:15482"
/db_xref="MIM:606094"
/translation="MLLLLLLLPPLLCGRVGAKEQKDYLLTMQKSVTVQEGLCVSVLC
SFSYPQNGWTASDPVHGYWFRAGDHVSRNIPVATNNPARAVQEETRDRFHLLGDPQNK
DCTLSIRDTRESDAGTYVFCVERGNMKWNYKYDQLSVNVTASQDLLSRYRLEVPESVT
VQEGLCVSVPCSVLYPHYNWTASSPVYGSWFKEGADIPWDIPVATNTPSGKVQEDTHG
RFLLLGDPQTNNCSLSIRDARKGDSGKYYFQVERGSRKWNYIYDKLSVHVTALTHMPT
FSIPGTLESGHPRNLTCSVPWACEQGTPPTITWMGASVSSLDPTITRSSMLSLIPQPQ
DHGTSLTCQVTLPGAGVTMTRAVRLNISYPPQNLTMTVFQGDGTASTTLRNGSALSVL
EGQSLHLVCAVDSNPPARLSWTWGSLTLSPSQSSNLGVLELPRVHVKDEGEFTCRAQN
PLGSQHISLSLSLQNEYTGKMRPISGVTLGAFGGAGATALVFLYFCIIFVVVRSCRKK
SARPAVGVGDTGMEDANAVRGSASQGPLIESPADDSPPHHAPPALATPSPEEGEIQYA
SLSFHKARPQYPQEQEAIGYEYSEINIPK"
BASE COUNT 554 a 648 c 550 g 428 t
ORIGIN
1 gaaccctgag gaacagactt acctcagcaa ccctggcacc tccaacccga cacatgctac
61 tgctgctgct actgctgcca cccctgctct gtgggagagt gggggctaag gaacagaagg
121 attacctgct gacaatgcag aagtccgtga cggtgcagga gggcctgtgt gtctctgtgc
181 tttgctcctt ctcctacccc caaaatggct ggactgcctc cgatccagtt catggctact
241 ggttccgggc aggggaccat gtaagccgga acattccagt ggccacaaac aacccagctc
301 gagcagtgca ggaggagact cgggaccgat tccacctcct tggggaccca cagaacaagg
361 attgtaccct gagcatcaga gacaccagag agagtgatgc agggacatac gtcttttgtg
421 tagagagagg aaatatgaaa tggaattata aatatgacca gctctctgtg aatgtgacag
481 cgtcccagga cctactgtca agatacaggc tggaggtgcc agagtcggtg actgtgcagg
541 agggtctgtg tgtctctgtg ccctgcagtg tcctttaccc ccattacaac tggactgcct
601 ctagccctgt ttatggatcc tggttcaagg aaggggccga tataccatgg gatattccag
661 tggccacaaa caccccaagt ggaaaagtgc aagaggatac ccacggtcga ttcctcctcc
721 ttggggaccc acagaccaac aactgctccc tgagcatcag agatgccagg aagggggatt
781 cagggaagta ctacttccag gtggagagag gaagcaggaa atggaactac atatatgaca
841 agctctctgt gcatgtgaca gccctgactc acatgcccac cttctccatc ccggggaccc
901 tggagtctgg ccaccccagg aacctgacct gctctgtgcc ctgggcctgt gaacagggga
961 cgccccccac gatcacctgg atgggggcct ccgtgtcctc cctggacccc actatcactc
1021 gctcctcgat gctcagcctc atcccacagc cccaggacca tggcaccagc ctcacctgtc
1081 aggtgacctt gcctggggcc ggcgtgacca tgaccagggc tgtccgactc aacatatcct
1141 atcctcctca gaacttgacc atgactgtct tccaaggaga tggcacagca tccacaacct
1201 tgaggaatgg ctcggccctt tcagtcctgg agggccagtc cctgcacctt gtctgtgctg
1261 tcgacagcaa tccccctgcc aggctgagct ggacctgggg gagcctgacc ctgagcccct
1321 cacagtcctc gaaccttggg gtgctggagc tgcctcgagt gcatgtgaag gatgaagggg
1381 aattcacctg ccgagctcag aaccctctag gctcccagca catttccctg agcctctccc
1441 tgcaaaacga gtacacaggc aaaatgaggc ctatatcagg agtgacgcta ggggcattcg
1501 ggggagctgg agccacagcc ctggtcttcc tgtacttctg catcatcttc gttgtagtga
1561 ggtcctgcag gaagaaatcg gcaaggccag cagtgggcgt gggggataca ggcatggagg
1621 acgcaaacgc tgtcaggggc tcagcctctc agggacccct gattgaatcc ccggcagatg
1681 acagcccccc acaccatgct ccgccagccc tggccacccc ctccccagag gaaggagaga
1741 tccagtatgc atccctcagc ttccacaaag cgaggcctca gtacccacag gaacaggagg
1801 ccatcggcta tgagtactcc gagatcaaca tccccaagtg agaaactgca gagactcagg
1861 cctgtttgag ggctcacgac ccctgcagca aagaagcccg agactgattc ctttagaatt
1921 aacagccctc catgctgtgc aacaggacat cagaacttat tcctcttgtc aaactgaaaa
1981 tgcgtgcctg atgaccaaac tctccctttc tccatccaat cggtccacac tccccgcccc
2041 cggcctctgg tacccaccat tctcttctct acttctctga ggtcgactat tttaggttcc
2101 aaatatagtg agatcgtaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa
//