LOCUS BC035805 2595 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens caspase recruitment domain family, member 9, mRNA
(cDNA clone IMAGE:5745585), with apparent retained intron.
ACCESSION BC035805
VERSION BC035805.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2595)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2595)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: l Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47717130
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2595
/db_xref="H-InvDB:HIT000094096"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5745585"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 495 a 775 c 873 g 452 t
ORIGIN
1 ggaagtgcac aggcgtccgg cgtgctcctc cctccctgca gccccgggca gcatctccca
61 gaggctccgc ggcccaggct cctggtgtgt ctgcagtgca ggtggctcct ggaagaccct
121 caggtgggtg ggtctggtgc tttctgaaag gtggccagga aggttggcgt tggcctagtt
181 caggatcctg gcactgatcc cccagagcag cctgaggctt cccacaggca gccaggcagc
241 ctccgccatg cggccccgtc cctttcacgg cccctgggcg gagatgtgtt catttcagtg
301 gaattacggt ggcagatggg accctgcatt tcaagctggg gaagcaggaa aggggcccag
361 tgttcccagg actgtctacc gtgtggccag tgtttttatt cagtcccttg tctgtcaaaa
421 ctgtcctgaa tggggtgaca aagtgcagcg ggaagttgag aaatgcctca aaagaccaag
481 cctggggcaa ctatgtctcc aggagcagtg acccagctcc tctgggctgg aaaccagcgt
541 ttcccagcgg ggctggaggc tgtctgagga ccatgtggct gctcccagcc ttgccgcagt
601 cccagtctca gagggagtgg ctttcagcgg ctgaggcccc caccatgctg gcagaaaggg
661 acagcagtgg ctggtcccaa catgggtagt tctgttgcag ccactgggat gggggccggg
721 cctcatctgg ggcaggagaa gagtccaggg attcactggt gcccggcacc tcaacctgga
781 gaaaacaccg cagcagcact cctggccagc caagggcaac actgacagcc cctcccaggg
841 ttgcggggcc ggcagggggt gacagagaca cgctcctgtg ggcagctctt cccggccagt
901 gcagcgaccc cgcagctgca gcagggctgg gtggccactc ttgcatcatc agcagccggc
961 cgtggaggag ggagggcaca gccagggatg tgagcaggcg tcggtcaggg gaatgaggaa
1021 gtcccacaag aaccggctcc cccagctgct gtgctggtgg gagggccact ggccaacctg
1081 ctctcaccca gcttgggctg gccatagtgc caggcagttg ccctcagctc ctctgcccat
1141 tccagccatg gaggtggcta accttgcagg ctccagggcg tgatgggagt gtccaggagg
1201 cagaggccag agggggtcat gctgtagggg gagttcctct ctcagacccc atctgtgcct
1261 cccccgctgc gtatctgggt gacatggatg ccaacgggca ggagcaaggg ctgggaaagg
1321 ctgcggaggg gccctcggct ggtctggtgg ggagcggggt cactgtgtct ctgctgcctc
1381 cctgggggat ccagcgtggg gatgggacac ggagctgggc acctctcctg gatgcccctg
1441 ggctgatccc cctcgatgcc ctgacgagag ccctggccca gcgtctgaga aggagtggga
1501 gctgggcccg ggtgggggca ggagccggca tcgctctcag cactgcccca cactccccag
1561 cctgcctgct gaggccatgt cggaccacaa ggtctctgcc cacagtgctc ggggtgcggt
1621 gtctgggctg cgaagtggat ccccctcctt tcttgggcac tgcagcagct tggggggctt
1681 tttggacgtg gatgtgcctg gtcctggttt cccgagggcc tttacagtgg atgaggaggt
1741 gaacacagga gtcctgagag caagcaccac ctcgggcttt gttgtagaaa caatggcccg
1801 gaccccaggc cggagccgtg gcttggcctc ctgggtgtgt cttggcatct gaaatgcagg
1861 ctacccacac cggctcacct ccaggggtac aggcaggtcc cacagggaga gcttggcgct
1921 gagctgaggc tgtctgggct cctcgcctcc caaccagtct gcagttacag gggccagtgg
1981 ggggcgggtg agaaggacgg gttccctcag gggagccggc cggagcccga gccttccccc
2041 ttctccagga cgcaggcctg agcagcgggg agccgcccga gaaggagcgg cggcgcctca
2101 aagagagttt tgagaactac cgcaggaagc gcgccctcag gaagatgcag aaaggatggc
2161 ggcaggggga ggaggaccgg gagaacacca cgggcagcga caacaccgac actgagggct
2221 cctagccgca gcagcgcagg ccccgaccag ggcacaccca ccggcccggc ctcctgccac
2281 ccgggggtgc cgacgccctg gggcgcagac ttccccgagc cgtcgctgac ttggcctgga
2341 acgaggaatc tggtgccctg aaaggcccag ccggactgcc gggcattggg gccgtttgtt
2401 aagcggcact cattttgcgg aggccatgcg ggtgctcacc acccccatgc acacgccatc
2461 tgtgtaactt caggatctgt tctgtttcac catgtaacac acaatacatg catgcactgt
2521 attagtgtta gaaaacacag ctgcgtaaat aaacagcacg ggtgacccgc aaaaaaaaaa
2581 aaaaaaaaaa aaaaa
//