LOCUS BC035800 1203 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 196, mRNA (cDNA clone
MGC:46244 IMAGE:5734487), complete cds.
ACCESSION BC035800
VERSION BC035800.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1203)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1203)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: j Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542748.
FEATURES Location/Qualifiers
source 1..1203
/db_xref="H-InvDB:HIT000051514"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46244 IMAGE:5734487"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1203
/gene="C20orf196"
/gene_synonym="FLJ25067"
/gene_synonym="RP4-784N16.1"
/db_xref="GeneID:149840"
/db_xref="HGNC:HGNC:26318"
CDS 88..705
/gene="C20orf196"
/gene_synonym="FLJ25067"
/gene_synonym="RP4-784N16.1"
/codon_start=1
/product="chromosome 20 open reading frame 196"
/protein_id="AAH35800.1"
/db_xref="GeneID:149840"
/db_xref="HGNC:HGNC:26318"
/translation="MAARDATSGSLSEESSALDLPSACDIRDYVLQGPSQEANSEAFS
SLEFHSFPYSSDVDPDTSNLNIEQNNSWTAENFWLDPAVKGQSEKEEDDGLRKSLDRF
YEMFGHPQPGSANSLSASVCKCLSQKITQLRGQESQKYALRSFQMARVIFNRDGCSVL
QRHSRDTHFYPLEEGSTSLDDEKPNPGLSKDITHFLLQQNVMKDL"
BASE COUNT 318 a 297 c 299 g 289 t
ORIGIN
1 ccgcgttccg gttgcggatg gtgagtgtgt cggggggctt ggcggctttt ctcctcagtt
61 ttctggagtg ctttggagga gaggactatg gcagccaggg acgccacttc aggcagcctg
121 tcagaggaga gcagtgcttt ggacctgcca tcagcgtgtg acataagaga ttacgtcctg
181 cagggaccca gccaagaagc caacagcgag gctttcagtt ctttggaatt ccattctttt
241 ccttattctt ctgatgtgga tccagacacc agtaacttaa atatagaaca aaataactcc
301 tggaccgctg agaacttctg gcttgaccct gctgtgaaag gccagtcaga gaaggaagag
361 gatgatggcc ttcggaaatc cctggataga ttctatgaaa tgtttggtca tccacagcca
421 ggctctgcaa actcactctc tgcatctgtc tgcaagtgcc tgtctcagaa aatcactcaa
481 ctaagaggcc aggagagcca aaagtatgcc ctccgcagtt ttcaaatggc ccgggtgatc
541 ttcaaccggg acggctgctc cgtcttacag aggcattcca gggacaccca cttctaccca
601 ctggaggaag gaagtacatc tttggatgat gaaaagccaa acccaggact gtcaaaggat
661 attactcatt tcctcttgca gcagaatgta atgaaagacc tgtaactggt gccgggcggt
721 gtgcagggta gtaatggagg tgctgtgcca tgaccagcag tgttggtggc cacccagatc
781 ccctagggtc tctggccagc tctgtgtgcc caatcccaat taagtgcttt gaggttaaag
841 gctggcacct gtgacctggt attggagcca gtcagcccat atggagagcc agcagggtct
901 gggagttctc cgtcctcttg gccaaggccg ctgactgact gggctacgag tcaaaagccc
961 agctcccttg cctcaaggaa ggacattctc tgaggagtaa tttatgctct agcactccct
1021 ttcctctaga tcggcctgag gctgggacat tacatgaaat cacacccttg ctgggcttaa
1081 tccctttccc taccctccca tttatttact ggtgtctctg ggagcctttc cttaataaac
1141 ctcttatatc tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1201 aaa
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