LOCUS BC035795 998 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens SET domain containing 1A, mRNA (cDNA clone
IMAGE:5737791), partial cds.
ACCESSION BC035795
VERSION BC035795.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 998)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 998)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC035795.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: j Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55741676.
FEATURES Location/Qualifiers
source 1..998
/db_xref="H-InvDB:HIT000094090"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5737791"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>998
/gene="SETD1A"
/gene_synonym="KIAA0339"
/gene_synonym="Set1"
/db_xref="GeneID:9739"
/db_xref="HGNC:HGNC:29010"
CDS 187..>998
/gene="SETD1A"
/gene_synonym="KIAA0339"
/gene_synonym="Set1"
/codon_start=1
/product="SETD1A protein"
/protein_id="AAH35795.1"
/db_xref="GeneID:9739"
/db_xref="HGNC:HGNC:29010"
/translation="MDQEGGGDGQKAPSFQWRNYKLIVDPALDPALRRPSQKVYRYDG
VHFSVNDSKYIPVEDLQDPRCHVRSKNRDFSLPVPKFKLDEFYIGQIPLKEVTFARLN
DNVRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKNLHLTSV
MGNIIHAQLDIKGQQRMKYYELIVNGSYTPQTVPTGGKALSEKFQGSGAATETAESRR
RSSSDTAAYPAGTTAVGTPGNGTACPVTHVKKKKKKKKKKKKKKKKKKKKKK"
BASE COUNT 283 a 288 c 258 g 169 t
ORIGIN
1 ggacgcgtgg gggccgcagc atctagatcg tcgtggcgaa gccgactctc cgggggatgc
61 ggccaatctc caagctccct gggccgcaac ttccgagcct cccagggcgc cggccgaggc
121 gaagccgcta ccctcggccc cgtgggtccc ccggcagcgc ctgtggcgaa atgtaaatga
181 gcaaagatgg atcaggaagg tgggggagat gggcagaagg ccccgagctt ccagtggcgg
241 aactacaagc tcatcgtgga tcctgccttg gaccctgccc tgcgcaggcc ttctcagaag
301 gtgtaccgct atgatggagt ccacttcagt gtcaacgact caaagtatat accagtcgaa
361 gacctccaag acccccgttg ccatgtcagg tccaaaaaca gagacttttc cctcccagtc
421 cctaagttta agctggacga gttctatatt ggacagattc cactgaagga agtgactttt
481 gcaaggctga atgacaacgt gcgggagacc ttcctgaagg atatgtgccg taagtacggt
541 gaggtggaag aggtagagat cctccttcac ccccgtacgc gcaagcacct gggcctggcc
601 cgtgtgctct tcaccagcac tcggggcgcc aaggaaacgg tcaaaaacct ccaccttacc
661 tccgtcatgg gcaacatcat ccatgcccag cttgacatca aaggacaaca acgaatgaaa
721 tactatgaac taattgtcaa tggctcctac acccctcaga ctgtgcccac tgggggcaag
781 gccctgagtg agaagttcca aggctcgggt gcagccactg agacggccga atcccgccgc
841 cgctcttcct ctgacacagc tgcctaccca gcaggcacca ctgcggtggg cactcctggc
901 aacggcaccg cctgcccagt gacacatgta aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//