LOCUS BC035791 3670 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens S100 calcium binding protein A1, mRNA (cDNA clone
IMAGE:5727317), with apparent retained intron.
ACCESSION BC035791
VERSION BC035791.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3670)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3670)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: h Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5454031
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3670
/db_xref="H-InvDB:HIT000051513"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5727317"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 882 a 1100 c 890 g 798 t
ORIGIN
1 caggtctcca cacacagctc cagcagccac atttgcaacc ttggccatct gtccagaacc
61 tgctcccacc tcaggcccag gccaaccgtg agtaccctgc cccactgggc tagtccctgg
121 cctgccagct tcagggagag gggtcttcag aagggctcca agaggctggg gaccatagca
181 ctgtggagca ctgaggatct gggaggagtc agtcagggtg agggcagttt gggatttggg
241 ggagacaggg tttggaaggt ggtgatgaga gacaaatgaa ctgaaggtcg gagagagagc
301 tggcagctca gcaaaggagg aagccagtgg ggaacccacc atgagcttcc tgaccgcctg
361 gccctcccac agggagccct caagtccctg ccaaggcccc ctctgtctcc caggtgttgg
421 gaagggtccc agccctcccc tgcctcgcct cctgtggggt aagaagagag cagatacaac
481 agctgtttct gcccccacct ctcctgccag ccttagtctc tgccaccccc accctgcctt
541 gccaagagct caggtcccgg gggagtctgg gggtggcagg gcaaagctcc catgatatgg
601 ggaagcagag atgtagggtg ctgtgcccct tcccaactcg acctccacag gacctcccct
661 ttctcctcct cccatttttg gcccagacct cttgactcct ctttcccccc attcttacct
721 ctttgtttcc ccatctcccc tgcccccaag tcctctcaga actgccacca cgtaaaatcc
781 caggctgctt tagggctcca ggtgacctcc agctgcccct ctggcatgga gcaggtaatc
841 aagctaccag cacccctccc tcaagcaccc cttatcccct catcagccac agcttgggtt
901 ccatctcccc catgtctctg tgacaactgc ttctcaggtc cggagttcag atgacactca
961 caagggcccc attgaagaac tgggatgtca ttcgatcagg ggccattgtc cagcccccta
1021 ggcctgggga aggatgggga catctgatcc gagacacctg agctgccccc tctggggttg
1081 tggaaggcca gactgtccca gggccaaggg aaagaggccc cccggcttgg cagtcttctc
1141 tctcaacaga ccactccttt ctcctttctt ctcctactct ctcccagccc cttgaactca
1201 aaggaccgca tgctttcagc cctttctctc ccccaacaca cagcagcccc attccccttg
1261 ctcccactat ccccgaatca accaggagtg agcagttgca gggacaacgc ctgcaggtct
1321 cctctcccac tccctgggaa ctctggctcc aaggaaaagg ctcagacatt cctctctccc
1381 cttctgccac ccaccagatg gaagggataa ttttgcagag gcaatgggag catatcccaa
1441 agaagccaaa atgacatgtt caggagagaa cagagttgaa ggaccaaaag gggcccccag
1501 ctgctgacag gaaactcaga gtcagtgaga cctccctccc ccagaaggct taggccaccc
1561 actggggctg ccatcccctc taccaggctg accgagggta ccagactgac tccttgctag
1621 gggtgggcag cagaaggaag gctgtagtgg acaccccagc ccaccaccct caacagcaga
1681 gcttggctat gctagacagg caaggtccag ggtaaaaata gagccagagg aagcatggcc
1741 cagtcctgtg accacccctg cctgccccac cctcctcaat ccctgcctgg gcagccactg
1801 cagacatcta ccacaggcct ctggagccag cccagctcca actgctctct ctccatgccc
1861 caaccctgat tccctctggc tggggtacag actgagggac acagagaaca ggcctgcact
1921 taggtctctt ggggtttccc tcacattgta aaatctcagg gaaagatcaa ttgcactagg
1981 gctctaatcc cacagctatt tgagctgtca gccagggcca gtcctgaggg ttcccctcac
2041 ctagacccca ggtactccgg gcctggtcct cagctcactt ccatgatggg ggtgggtagg
2101 tgcactgctg caatgggctc tgagctggag acggcgatgg agaccctcat caacgtgttc
2161 cacgcccact cgggcaaaga gggggacaag tacaagctga gcaagaagga gctgaaagag
2221 ctgctgcaga cggagctctc tggcttcctg gatgtgagca tagagtggtg gagtgggagt
2281 ggagtgggtg aaggttgggg gaatggggtg gacaccccct tgctatctcc ccaccccacc
2341 tccagctcag cctagcctct ttctttcctt tcccaggctt ctctcctggg tttttccagg
2401 ctcccctact cctcctgggt caagtcaaaa tgccctggtt tattgatcac ctgttaagtg
2461 ttaggccctg tgtagattca tcaataataa gacacacaga cttagaaggg aaagattgac
2521 acttaaaagt aaaccatgaa ctccaggaaa tacacagagc cttaacagat gtaccagaaa
2581 gggttatgag agattattaa cctgattgaa gtcagatggc tttcctgaag aggtggcact
2641 tgaaccatgg atttccattg gaagattatc tgggtaaatg cagacatttt aggaggaggt
2701 aactgaatga acaaaagcat gggagaaaga agaatgtgga gcatgtcagt agtttcattc
2761 aactggcatg aaggatgtag aaaactaggc tgctaaggct aaccagggcc ccaaagtaaa
2821 gaagcctcag gatacggtag aaagtgcacc ggttttgagg ttttattgga ctgggttcaa
2881 attccagccc tgctactttc tagctgtggg actttgggca tatttattta accaccgatt
2941 accaatttgt ttcttctcta gaatggaaat aatgaaacat acctcacatt atttgtatta
3001 gaattaaatt agacagtgct tgtaaagctc ctagtgtagt gcttgcttta ttataggcac
3061 tgaacatacg gtaactggtg tcattattat tcattctgcc aggtgaaaga gcttatgctg
3121 taggcaacag aagccctcaa gacttttgag gaggcctaga agagtcccat aattcaatgc
3181 agttcctctc gctcatcttt gcctcctgct cctcaaccac ccccttacct ctgactcagt
3241 gctgtaccct tccctataca cctccctctt cctctcctcc caccacaggc ccagaaggat
3301 gtggatgctg tggacaaggt gatgaaggag ctagacgaga atggagacgg ggaggtggac
3361 ttccaggagt atgtggtgct tgtggctgct ctcacagtgg cctgtaacaa tttcttctgg
3421 gagaacagtt gagcagacag ccacattggg cagcgccctt cctctccacc ctcccagacc
3481 tgcctcttcc ccctgcttcc acctcacccc acttatccct ctccataacc ccacccctgc
3541 ccaccccacc cccaccccca ccaagggcgc aagagtagcg gtccaagcct gcaactcatc
3601 tttcattaaa ggcttctctc tcaccagcca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3661 aaaaaaaaaa
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