LOCUS BC035788 5026 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens syntaphilin, mRNA (cDNA clone MGC:46096 IMAGE:5727912), complete cds. ACCESSION BC035788 VERSION BC035788.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5026) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5026) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Invitrogen cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 79 Row: h Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38202245. FEATURES Location/Qualifiers source 1..5026 /db_xref="H-InvDB:HIT000051511" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:46096 IMAGE:5727912" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_124" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..5026 /gene="SNPH" /gene_synonym="bA314N13.5" /gene_synonym="KIAA0374" /gene_synonym="MGC46096" /db_xref="GeneID:9751" /db_xref="HGNC:HGNC:15931" /db_xref="MIM:604942" CDS 237..1721 /gene="SNPH" /gene_synonym="bA314N13.5" /gene_synonym="KIAA0374" /gene_synonym="MGC46096" /codon_start=1 /product="syntaphilin" /protein_id="AAH35788.1" /db_xref="GeneID:9751" /db_xref="HGNC:HGNC:15931" /db_xref="MIM:604942" /translation="MAMSLPGSRRTSAGSRRRTSPPVSVRDAYGTSSLSSSSNSGSYK GSDSSPTPRRSMKYTLCSDNHGIKPPTPEQYLTPLQQKEVCIRHLKARLKDTQDRLQD RDTEIDDLKTQLSRMQEDWIEEECHRVEAQLALKEARKEIKQLKQVIDTVKNNLIDKD KGLQKYFVDINIQNKKLETLLHSMEVAQNGMAKEDGTGESAGGSPARSLTRSSTYTKL SDPAVCGDRQPGDPSSGSAEDGADSGFAAADDTLSRTDALEASSLLSSGVDCGTEETS LHSSFGLGPRFPASNTYEKLLCGMEAGVQASCMQERAIQTDFVQYQPDLDTILEKVTQ AQVCGTDPESGDRCPELDAHPSGPRDPNSAVVVTVGDELEAPEPITRGPTPQRPGANP NPGQSVSVVCPMEEEEEAAVAEKEPKSYWSRHYIVDLLAVVVPAVPTVAWLCRSQRRQ GQPIYNISSLLRGCCTVALHSIRRISCRSLSQPSPSPAGGGSQL" BASE COUNT 1001 a 1545 c 1523 g 957 t ORIGIN 1 cagctagccg cctcctgcag gggctcggga gagcaattcg gcggcccctg cagggcagct 61 gaagccatgg aagcctccgc aggtcgctga tcagggccag gcggctgcag cagcgactgc 121 agaggcgctg cgccaagccg ggccggagtg gtgcgagccg gcggggctgc ggagggccag 181 tggactcagc ccccgggata ccgcccatcc caccccttac tcggacccac agcctcatgg 241 ccatgtccct gccaggaagt agacggacct ctgctggatc acgcaggcgc acctctccac 301 ctgtgagcgt gcgggatgcc tacggcacct cttcgctcag cagcagcagc aattctggct 361 cctacaaggg cagtgacagc agtcccacgc caaggcgctc catgaaatac acgctgtgca 421 gtgacaacca tggcatcaag cccccgaccc cggagcagta cctgaccccc ctgcagcaga 481 aggaggtgtg catccggcac ctgaaagccc ggctgaagga cacacaggac cggctccagg 541 accgggacac agagattgat gacctgaaga cgcagctgtc acgcatgcag gaggactgga 601 ttgaggagga gtgccaccgc gtggaggccc agctggccct gaaggaggcc cgaaaggaga 661 tcaagcagct caagcaggtc atcgacactg tcaagaacaa cctgattgac aaggacaagg 721 ggctgcagaa gtacttcgtg gacatcaaca tccagaacaa gaagctggag acgctgctgc 781 acagcatgga ggtggcccag aatggcatgg ccaaggagga tggcactggg gagtcagccg 841 gtgggtcccc tgcccgctcc ctcacccgca gctccaccta caccaagctg agtgacccgg 901 ctgtctgtgg tgaccgccag ccgggtgatc cctccagcgg ctctgctgag gatggggcag 961 acagtggctt tgcagcagcc gatgacacac tgagccggac ggacgcgctg gaagccagca 1021 gcctgctgtc gtcgggggtg gactgtggca ccgaggagac ctcgctgcac agctccttcg 1081 gcctgggccc ccgcttccct gccagcaaca cctatgagaa gctgctgtgt ggcatggagg 1141 ctggtgtgca ggccagctgc atgcaggagc gtgccatcca gacagacttc gtgcagtacc 1201 agcctgacct tgacaccatc ctggagaaag tgacccaggc ccaggtctgt gggacagacc 1261 ctgagtcagg ggacaggtgc ccagagctgg atgcccaccc ttcagggccc agagacccca 1321 actcagcagt ggtggtgaca gtgggtgatg agctagaggc cccagagccc atcacccgtg 1381 gacccacccc acagcggcct ggtgccaacc ccaaccctgg ccagtcggtg agcgtggtgt 1441 gccccatgga agaggaggag gaggctgccg tggctgagaa ggagcccaag agctactgga 1501 gccgccacta catcgtggat ctgctggctg tggtggtgcc ggccgtgccc acggtggcct 1561 ggctttgccg ctcccagcgg cgccagggcc agcccatcta caacatcagc tccctgctgc 1621 ggggctgctg cactgtggcc ttgcactcca tccgcaggat cagctgccgc tcgctgagcc 1681 agccgagtcc cagcccagcg ggcggcggct cccagctctg agggggccca ttccggcagc 1741 ggcgcctgcg gcctgaccac tgattgtagg gatgccgttc ccccctccct tctcccatgg 1801 gcatcatctt atttatttag ttttgggtgt ggaactgttt ctttttttca agatgttaaa 1861 acagtcccgt ggaaggagca ggggttggag aaaggcatcc caaagcttcg atggagagca 1921 gggaaggggg acccaaggca ggaggtacac cagctggaca aattgcaggg aggggaggga 1981 gcgagggcca acccggcccc tctgtcccct tggctcttca gacagggcca gccctgctca 2041 ggaagtctct ggctgtcttc atgtggggaa gccaggcttg agttgcccat aggcccctgc 2101 cctgcaccat cctgtccagt gccctgcgca ctccatgccg tctcttccaa gccaccttgc 2161 ccgcagccca ggctcctggg ccagtgctct ctcctcaaat ggaggcagcc atggcctgaa 2221 gtgcagatca ctgacccagg gctcagagca gaggccagaa ccactgggcc ggccggcatt 2281 ccagcctccc cagactgctg cccaccttgg gactcaggag ctcagtcaag gccacaggct 2341 ggaggagaga cggggctggg cgcaaggtgg cggagggcag tgtgggttct gtgtctgtct 2401 gttcatccca ggctttcccg tcatcccttt cctcttggca cttctgggtg tgtcagtcat 2461 tattcctgtg aggtagctaa gcccggcaag ctcagtgctg gggtaggagg gcctgcctga 2521 gtcccagctc ccagctggag aatccaccag cacaagaaga ggaggcaggg gcagaaaccc 2581 aagggggctc ccccagcctt ccaaggtgag gccatctcat ctgcaggctg ggaggcaggg 2641 ctggactcag gaacccacag cttactgaaa aagccagagg ccatgactgc ccccagaaac 2701 ttgccccgag tttctctggg gccctcaggc ccaacttctg ctttgcacta tgttcacttt 2761 ggggttggtt ctcagccatc caagggtctc cagtgaggtg gctgcttgct gtctgagatg 2821 agggttccta aaccttaaac ctctctgcct ctggaggagg gtggggtatt ctggcaggat 2881 gaatcgcagg atggcgcgta ctgaagccac gatgttcatc caggccaaag cagggtgtcc 2941 tgggataggt ttcctaggca ggggcgtggc agagcaggta ggcgccctgc agcctccctg 3001 ctcccagccc aaggccagtc ggcctgggaa gttcactgcc ccaactcttt tcccgggacc 3061 atactgagtc ccccagccac gctgctgaca ttaccattat tattttacca agtaaactca 3121 ctccttttcc cccacagggg ttacacccat ctggttgtcc cacccactct tcagaggcta 3181 ggccccacct ctgggggttg gagggaccct gtgtcttact cgcccctctg gcctaagggc 3241 cactccggtt atctgccaag gttgcttgcc ctcaccccaa tgctccaaca gccattgcct 3301 aactcatggg ctctgccctt ctgctcggtg ccctccacgt gaggcggggc acctgcatgc 3361 actgggaggg ggcggctggc ccagccctcg gggcaggagc cccctctgcc acacgctttg 3421 tgcctccaaa gctccccccg ccttggtcag ggcctcagac cagccaacct ttgtggaata 3481 agccccagcc cagccaaacc aaacccagat gcctgaggcc tggctggggc tgcccccgca 3541 ggacactgtg gccatgccac ggagggggca gtggacaaaa ccaatccaaa gccaagccgg 3601 gactggctgc ggacccagcc tcctgtgccg cgcactcacg gagctgcgta gtctcctcag 3661 acatagtcaa agctttgccg agaaaagaaa tgtatgaact atatttgaca acataaaatc 3721 tctctatttt tcaccactgg aatttagtca agcttcaggc ccctctgctc ctgtctgtgt 3781 cttgcgtctg tggccttcct attgtgtctt gtgttttggt ggatgtgaca gggctggggc 3841 cacagtctac tctgtctctg ctgctagaga agccacctgt ggaggactgg gctgtggttg 3901 ggcctgaggc ctgtggagga ggtgagtgta gccagcagcg gccgtctact cctgttctgg 3961 cctgagacca ccggtgtggg tcacgagggc cctggcccac agtgttgagg gtcctctctt 4021 tcgggggctc tcctggggcc ttcgatgggc ttttcttctt gtcagtggag ggagcagctc 4081 cccactcagc cctgggacag gccctgggac tgtggtggcc ggtggccctg gcccagctct 4141 ggagtgcatg tgtgtgtgct cagatcccgc atctatgcaa aggtgcaggc tgcctgtgag 4201 gctccaggcg gtggaggtgc ggcagctgct gctcaggtgc catgccctga agaggcaggg 4261 tacacatggg gctgggaggg caaagatggg gcggggcctc cccctgagag agctcaccct 4321 ccacagtgac ccttttcctt cctgcctaat acctcctccc gttgggctgt gacttttcct 4381 cctgccctca gcctctgaaa cagaaatctt tggggcctcc cctttcccca gcgtctggca 4441 agagctgatg aggtcctgag gaacagtgtc cccaggaacc accttctgga gcctagcggc 4501 cagacgtggc ttctcctgag ttctagggct cgggccagag tggcactact gcccggccag 4561 tccaggctca ggcaggaatc ggacgctggg gcccgggctc tgcacagaga gctgggcttg 4621 agtggagttt attgtagatt tctcccaagg ggatcactta gcttctcact gacacaccct 4681 tcccaattgc cacaagcgca ggggtatctt acagcacttt ggggaggggt gggacaaact 4741 gcaaggttct ggggccaagg cctacccagg ggcctctgcc cagagaactc acaaccccct 4801 ctctgaccta ggggacaatg caaacaggtc acagtgcatt cccatattag gccatcccct 4861 tcacgaagaa ttcaggggat gtgggaagtg gggaggcggg gagggatctt gactcttgtc 4921 tcctttgtcc ttttgttcag acagagttgt acctgcagca gacaactctg aattaaagca 4981 tgaaaacaca gcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa //