LOCUS BC035737 1252 bp mRNA linear HUM 29-JUL-2008
DEFINITION Homo sapiens chromosome 2 open reading frame 80, mRNA (cDNA clone
MGC:46742 IMAGE:5730487), complete cds.
ACCESSION BC035737
VERSION BC035737.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1252)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1252)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: i Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1252
/db_xref="H-InvDB:HIT000094053"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46742 IMAGE:5730487"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1252
/gene="C2orf80"
/db_xref="GeneID:389073"
/db_xref="HGNC:HGNC:34352"
CDS 173..754
/gene="C2orf80"
/codon_start=1
/product="C2orf80 protein"
/protein_id="AAH35737.1"
/db_xref="GeneID:389073"
/db_xref="HGNC:HGNC:34352"
/translation="MERRLIKKEMKKLLGDYIGIRLRENEFDPKGRRQLTFLDDMAHY
DLAISVALQWLDPSEDLTWLEWEELKIPLHGRPIYPNRREREAMILSSYAGILMNSIP
IEEVFKIYGADSSADSGTIKVPRVSSLRLSLHPFAMLTAPKAAAYARKQSVKSRKVTT
NKNATSISAKEANATEWKSSQRFSDTQPKHKVT"
BASE COUNT 425 a 244 c 255 g 328 t
ORIGIN
1 cctgatgtct gtgagcacca gtctgagatg cgcggatgct tcagcatgcc tccagaagca
61 gagaaagaac aaaagcactg gaaccggtct ccggttgcct ctagactcag agaagctggg
121 tctaagtgta gtgttagctg cagatacctg ctcagctggc taagccttta acatggaaag
181 aaggctcata aagaaggaaa tgaaaaagct cttgggagat tatattggca tcagacttcg
241 ggaaaatgaa tttgacccaa aaggaagacg gcaactcacc tttctagatg atatggcaca
301 ctatgacttg gccatcagtg ttgctttgca atggctggat ccctcagaag acttaacttg
361 gctggagtgg gaggaactga aaataccact ccatggcaga cccatatatc caaatcgtag
421 agaacgagaa gctatgattt tatcatctta tgctggaatc ttaatgaaca gtatcccgat
481 tgaggaagtc tttaaaattt atggggctga ttcttctgcc gattctggta ccatcaaggt
541 tccccgagtt tcatctctcc gcctctcctt gcaccccttt gccatgttaa cagcacccaa
601 agcagcagca tacgcccgca aacagagtgt caagtcaaga aaggtaacaa caaataaaaa
661 tgccaccagc atctctgcaa aggaagcaaa tgccacagaa tggaaatcat cacaaaggtt
721 ttcagacaca cagccaaagc acaaagtcac ttagaaaatt ggaattgtac catggaactt
781 cataatagat tctctgggag cagacgagaa gcatcatctt aaaaccacag ctcttgccag
841 tacatttttc tttacaactg tttttggtac aactgcactg aagtgttatt tttgatgttg
901 agctttcttc ttttagaagc atattgcatg gctacatttt cttaaaaaaa aaaaactgtg
961 accttatgct acttcattgt gactggaaga ctgctggaga attcagaaag tatatagtat
1021 ttctgtgtta gagcaagctg gctttgtagc acattttaca aatgtgtggc attgaatatt
1081 gcacagtgat ggagtgggag gcagatttcc aaagagttaa tccaaaataa aattaatctg
1141 tcattgattg cctttactgt gttctcatat gaaaagaatg tttaaatcat ttcaataaag
1201 cattaaaaaa atgaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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