LOCUS BC035735 1774 bp mRNA linear HUM 26-JUN-2007
DEFINITION Homo sapiens copine family member IX, mRNA (cDNA clone MGC:46340
IMAGE:5729888), complete cds.
ACCESSION BC035735
VERSION BC035735.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1774)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1774)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: i Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25121973.
FEATURES Location/Qualifiers
source 1..1774
/db_xref="H-InvDB:HIT000094052"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46340 IMAGE:5729888"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1774
/gene="CPNE9"
/db_xref="GeneID:151835"
/db_xref="HGNC:HGNC:24336"
CDS 172..1683
/gene="CPNE9"
/codon_start=1
/product="CPNE9 protein"
/protein_id="AAH35735.2"
/db_xref="GeneID:151835"
/db_xref="HGNC:HGNC:24336"
/translation="MSLGGASERSVPATKIEITVSCRNLLDLDTFSKSDPMVVLYTQS
RASQEWREFGRTEVIDNTLNPDFVRKFVLDYFFEEKQNLRFDVYNVDSKTNISKPKDF
LGQAFLALGEVIGGQGSRVERTLTGVPGKKCGTILLTAEELSNCRDIATMQLCANKLD
KKDFFGKSDPFLVFYRSNEDGTFTICHKTEVVKNTLNPVWQPFSIPVRALCNGDYDRT
VKIDVYDWDRDGSHDFIGEFTTSYRELSKAQNQFTVYEVLNPRKKCKKKKYVNSGTVT
LLSFSVDSEFTFVDYIKGGTQLNFTVAIDFTASNGNPLQPTSLHYMSPYQLSAYAMAL
KAVGEIIQDYDSDKLFPAYGFGAKLPPEGRISHQFPLNNNDEDPNCAGIEGVLESYFQ
SLRTVQLYGPTYFAPVINQVARAAAKISDGSQYYVLLIITDGVISDMTQTKEAIVSAS
SLPMSIIIVGVGPAMFEAMEELDGDDVRVSSRGRYAERDIVQEGCCSLGTSVV"
BASE COUNT 430 a 499 c 488 g 357 t
ORIGIN
1 ggcggccact gtcagggcgc gagcggctgg agcgcacgca gggctggagc gagtgcagcc
61 gccgccgccg ccgacaccgc ggcacatggg ccggccccgc cgctgccgtc gcccctagcc
121 ccagcagccc tggtctcgca gcctcctgcg gctctggtcg cccgaccagc catgtctctc
181 ggcggagcct ccgagcgcag cgtcccggcc accaagattg aaattaccgt gtcctgccgg
241 aacctgctag accttgatac cttctccaag tccgacccca tggtggtgct ttacacgcag
301 agccgggcca gccaggagtg gcgggagttc ggacggaccg aggtgattga taacacgctg
361 aacccagact tcgtgcgcaa attcgtcctc gactatttct ttgaggaaaa gcaaaatctg
421 cgcttcgatg tgtacaacgt ggactccaaa accaacatct ccaaaccgaa ggatttcctg
481 ggacaagcgt tcctggccct gggagaggtg attggaggcc agggcagccg agtagagcga
541 accctcacgg gtgtaccagg caagaagtgt gggaccatat tgctgactgc agaagagctt
601 agcaattgtc gggacattgc caccatgcag ctgtgtgcaa acaagctgga caagaaggac
661 ttctttggga aatcagaccc cttccttgtg ttctacagga gcaatgagga tggcacgttc
721 accatctgcc acaagacaga ggttgtgaaa aacacgctga atcctgtgtg gcagcccttc
781 agcatccctg tgcgggctct gtgcaatgga gactatgaca gaacggtgaa gattgatgtg
841 tacgactggg accgggatgg aagccacgat ttcattggtg agttcaccac cagctaccgg
901 gagctgagca aggcccagaa ccagttcaca gtatatgagg ttcttaaccc tcggaagaaa
961 tgtaagaaga agaaatatgt caactcagga actgtgacgc tgctctcctt ctctgtggac
1021 tctgaattca cttttgttga ttacatcaag ggagggacac agctgaactt cacagtagcc
1081 attgacttca cggcttccaa tgggaatcct ctgcagccta cctccctgca ctacatgagt
1141 ccctaccagc tcagcgccta tgccatggcc ctcaaggcag tgggagagat catccaggac
1201 tatgacagtg ataagctctt cccagcttat ggctttgggg ccaagctgcc cccagaggga
1261 cggatctccc accagttccc cctgaacaac aatgatgagg accccaactg tgcgggcatc
1321 gagggtgtgc tggagagcta tttccagagc ctgcgcacag tgcagctcta tgggcccacc
1381 tactttgctc ctgtcatcaa ccaagtggcc agggctgcag ccaagatctc tgatggctcc
1441 cagtactatg ttctgctcat catcactgat ggggtcatct ctgacatgac gcagaccaag
1501 gaggccatcg tcagcgcctc ctcattgccc atgtctatca ttatcgtcgg tgtaggacca
1561 gccatgtttg aggcaatgga agagttggac ggtgatgatg tgcgcgtgtc ctctagggga
1621 cgctacgcag agcgggacat cgttcaggaa ggttgctgca gccttggcac atccgtggtg
1681 taggtcggga ggtccccaag gcccctgccc tctagtggag acaaccaaca ataaataatc
1741 acacaaagaa aaaaaaaaaa aaaaaaaaaa aaaa
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