LOCUS BC035728 1441 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens collagen, type XXVII, alpha 1, mRNA (cDNA clone
IMAGE:5723750), partial cds.
ACCESSION BC035728
VERSION BC035728.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1441)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1441)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: g Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1441
/db_xref="H-InvDB:HIT000094047"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5723750"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 211 a 529 c 447 g 254 t
ORIGIN
1 cggcggggag gcagcttcca ccgccctccg cgcgccctca cccggccttg ctctgcctcc
61 ggggaccgcc agcagcccgc ctccaaaagt ttgatcatct ctctctctct ttttcttgct
121 tcttcttcct ttttggtgga agcagaaaag gaccgaggca ggggcgagcg cggcgcccgg
181 actcctggga ccatgggcct ggcgcgggcg cccgcggggc cccagccgcg ctgcctgcct
241 gctcgggcgc ccctgggcgc ggggctgcgc tgggggcgcg ggggccgcgc gctctaagcc
301 ggcctggcgc ggcggggcgg ggggctggcg gccccatggg gcgcgcccac acttgccccc
361 cgggctcggg agcatgaagt aggggcctgc catgggagcg ggatcggcgc ggggggcccg
421 aggcacagcg gcggcggcgg cggcgcgcgg gggggggttt ctcttctcct ggatcttagt
481 ctcgtttgcc tgtcacctgg cctccaccca aggagctcct gaagatgtgg acatcctcca
541 gcggctgggc ctcagctgga cgaaggccgg gagccctgca cccccgggag tcattccttt
601 ccagtcgggc ttcatcttta cgcagcgggc ccggctccag gctcccacgg gcaccgtcat
661 tcctgccgcc ttgggcacag agctggcact ggtgctgagc ctctgctccc accgggtgaa
721 ccatgccttc ctcttcgctg tccgcagcca gaaacgcaag ctgcagctgg gcctgcagtt
781 cctccccggc aagacggtcg tccacctcgg gtcccggcgc tcagtggcct tcgacctcga
841 catgcacgac gggcgctggc accacctggc cctcgagctc cgaggccgca cagtcactct
901 ggtgactgcc tgcgggcagc gccgggtgcc tgtcctgctg cctttccaca gggaccctgc
961 actcgaccct gggggctcct tcctctttgg gaagatgaac ccgcatgcag tccagtttga
1021 aggtgctctc tgccagttca gtatctaccc tgtgacgcag gtcgctcaca attactgtac
1081 ccacctgagg aagcagtgtg gacaggctga cacgtaccag tccccactgg gacctctctt
1141 ctcccaagac tctggcagac cttttacctt ccagtccgac ctcgccctgc taggcctgga
1201 gaacttgacc actgccacac cagccctggg gtcactgcca gcaggcaggg gacccagggg
1261 gactgtggca cccgccacgc ccaccaagcc ccaaaggact agccccacaa accctcacca
1321 gcatatggcg gtgggaggcc cagcccaaac cccgctgcta cctgccaagc tgtcagccag
1381 taacgcactt gatcccatgc tcccagcctc tgttggcggc tctaccagaa cgcctcgccc
1441 t
//