LOCUS BC035674 3403 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens WD repeat domain 40B, mRNA (cDNA clone MGC:46344
IMAGE:5741971), complete cds.
ACCESSION BC035674
VERSION BC035674.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3403)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3403)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: k Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341942.
FEATURES Location/Qualifiers
source 1..3403
/db_xref="H-InvDB:HIT000051467"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46344 IMAGE:5741971"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3403
/gene="WDR40B"
/gene_synonym="KIAA1892L"
/db_xref="GeneID:139170"
/db_xref="HGNC:HGNC:29395"
CDS 244..1635
/gene="WDR40B"
/gene_synonym="KIAA1892L"
/codon_start=1
/product="WD repeat domain 40B"
/protein_id="AAH35674.1"
/db_xref="GeneID:139170"
/db_xref="HGNC:HGNC:29395"
/translation="MAQQQTGSRKRKAPAVEAGAESSPSQGLAAADGEGPLLLKRQRR
PATYRSMAHYLKVREVGGWGPARLQGFDGELRGYAVQRLPELLTERQLELGTVNKVFA
SQWLNSRQVVCGTKCNTLFVVDVESGHIARIPLLRDSEARLAQDQQGCGIHAIELNPS
KTLLATGGENPNSLAIYQLPSLDPLCLGDRHGHKDWIFAVAWLSDTVAVSGSRDGTVA
LWRMDPDKFDDTVAWHSEVGLPVYAHIRPRDVEAIPRAIINPSNRKVRALACGGKNQE
LGAVSLDGYFHLWKAGSALSRLLSIRLPYFRDNVCLTYCDDMSVYAVGSHSHVSFLDL
RQDQQNIRPLCSREGGTGVRSLSFYRHIITVGTGQGSLLFYDVRAQKFLEERASATLE
SSSGPARRKLRLACGRGWLNHNDFWVNYFGGMEVFPNALYTHCYNWPEMKLFVAGGPL
PAGLHGNYAGLWS"
BASE COUNT 863 a 811 c 820 g 909 t
ORIGIN
1 tctcgccgca cgctgacttt gctctcactg cccggccaga cgcacttccc gccttcgcct
61 aggtctgcac cgccaccgcc gccctctccc gcgcgtccct cacccggtcc gccactgccg
121 cgcctcagaa tccgaaggct cggttccagc gcagccatcc acgccgccgc cacgaccgac
181 tccggagcca cgcgctgcaa ccgccaccaa cgccttgccg ccgccgctcg cccgccgccc
241 accatggccc agcagcaaac aggtagcagg aaacggaaag cgcccgcggt cgaggcgggc
301 gccgagagct cgccgtcgca gggcttggcg gcagcggacg gtgaggggcc gctgctactc
361 aagaggcaga ggcggccggc gacgtatcgc tcgatggcgc actatctgaa ggttcgggag
421 gtaggcgggt ggggccccgc caggctccag ggcttcgatg gcgagctgcg gggctacgcg
481 gtacagaggc tgcccgagct gctgacggag cgccaactgg agctgggcac ggtcaacaag
541 gtgttcgcgt cacagtggct gaactccagg caggtggtgt gcggcaccaa gtgtaacacg
601 cttttcgtgg tggacgtgga gtcaggccac atcgcgcgca ttcccctctt gcgggacagt
661 gaggccaggc tggcccagga ccaacagggc tgcggcatcc atgccatcga gctgaatccc
721 tccaagacgc ttctggccac cggcggcgaa aaccccaaca gcctggccat ctaccagctg
781 ccctccctgg atcccctgtg cctgggcgac cgccatggcc acaaggactg gatcttcgcc
841 gtcgcctggc tgagtgacac cgtagccgtg agcggctccc gcgacggcac tgtggcgctg
901 tggcggatgg acccggacaa gttcgatgac actgttgcct ggcatagcga ggtgggtctc
961 cccgtatatg cccacatccg tccgagggat gtggaggcca tccccagggc catcatcaac
1021 cccagtaacc gcaaggtgcg ggccctggcc tgcggcggca agaaccagga actgggagcg
1081 gtgtccttgg acggctactt ccacctgtgg aaagccggga gcgcactatc caggctgctg
1141 tccatcaggc tgccctactt ccgggataat gtgtgcctga cctactgtga tgatatgtct
1201 gtgtacgccg tgggctccca ttcccacgtc tctttcctgg atctgcgcca ggaccagcag
1261 aacatccggc ccctgtgttc tcgagagggt ggcacaggcg tgcggtcgct gagcttctac
1321 cgccacatca tcactgtggg caccggtcag ggctccctgc tcttctatga cgtccgggcc
1381 cagaaattcc tggaggaaag agcctccgcc accctggagt cctcttcggg acctgcaagg
1441 aggaagctca ggcttgcctg tggcagaggc tggctcaacc acaatgattt ctgggtgaat
1501 tactttggtg gcatggaagt gtttcccaat gcgctctaca cccactgcta caactggcct
1561 gagatgaagc tctttgtggc tggggggcct ctccctgcag gcctccatgg gaactatgca
1621 ggcctctgga gctaaggatg accgccttgt actccaggtg gaaccagccc agcttaattt
1681 gtactcctcc aagcagagag agtgagtggt cctttggtca atgaaaactt ggctttaaga
1741 ctttttgact cctttccaac accatctttt ggaattttca tacaaagaaa tttggttaat
1801 cgttaatctt tagttgcatt ctctctttga gtgattcata cattctgttt ctttaagaag
1861 atgcagtcat ggtctttcag ttatgtatat ttgttttcct tgtttttcct cgttaccaat
1921 attacaacag cattgttttc agttattttt cattgcagat acgaagagaa aattttctag
1981 taagcaaggt gttcctacat cttttctgga gagcttacca tagttttata gcattgttca
2041 attggaaaag tacattccaa gttctagatt acctacgttt ggaaacactt aatttacaaa
2101 ttgtgatctt agtgtatata gtttttacgt tgttggtgct aaagtgcttt tttgaagttt
2161 attctctttc aaaataagtt atcatagaat cttgtgcttg tatcaaactc ctaattggtc
2221 ggaacacttt aggagtgcag gggttctgct tcattgcatt ttcagaatta acctgaaagt
2281 tgaaacaacc attttttttt atttcaaaac ttatttaagt tgttatcacc tgtccttaaa
2341 tagataaaag aatgtgtatt ttttcacttg ttgccttagt actatcaaga cttgtgaata
2401 tatttgaatg tatgttgttt gaaaaacttg cacagggcat tggagccatc atgaaaagca
2461 ggaaatgtaa acgtggaatg tatggcaggc tgggcagaat gtatactgat ccagggtata
2521 gactagatat ttttgctgtt gctgttttta ttataaaatg ttatatttga ggatatttaa
2581 cattttccaa ttctgcttaa gaggtaattc acaataaaaa aaacaaagac caaaaatagc
2641 acattctgaa aaaaagattc ttaataagat tttattttgt gaagttcaaa gattctttcc
2701 taaagtataa cgtgttgtta aaaagtagtg gtgttataac tctcaatgta atagtatgca
2761 atatcaagaa cacaggaagt tcgtttcaag ataggtgaga tttaaaataa ataggatgag
2821 gttgaagaaa agtatattgg agcgcagata aatataaatt gtggactgct atgaaaacag
2881 gttgtacttc tccatatgtg agactactgg aagtgagaag caatatttgt catttctaaa
2941 actggccagg ctgtgctgac ccaggattag taatttgtta tgtctgtttt cccttagatg
3001 tttgggcact cagatgctat cttggtgcac acacacaaca ttgctgttca gtcacaaatc
3061 cgaacaactt aatataataa attgtactaa aagtcattta agaaatacca aaaagtaagc
3121 ttttgtttct aaccattgtt ataaaggcta atataattgt tgttatatag cagtaagata
3181 tatttgtgtg catgcgtctc caagtcagtt gtaaatgtct tgagaacaga gaatacaatt
3241 gtcatcttta tattgcctca tttctccact aatacttagc aaataaaagg caataagtaa
3301 atatgtactg gttgaatgcc tctggagacc tagagtttaa agttttaagt caataaataa
3361 ataaatattt actcttaaaa aaaaaaaaaa aaaaaaaaaa aaa
//