LOCUS BC035643 1653 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 174, mRNA (cDNA clone
IMAGE:5547904), partial cds.
ACCESSION BC035643
VERSION BC035643.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1653)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1653)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: a Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46409343.
FEATURES Location/Qualifiers
source 1..1653
/db_xref="H-InvDB:HIT000093996"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5547904"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1653
/gene="C1orf174"
/gene_synonym="RP13-531C17.2"
/db_xref="GeneID:339448"
/db_xref="HGNC:HGNC:27915"
CDS <1..802
/gene="C1orf174"
/gene_synonym="RP13-531C17.2"
/codon_start=2
/product="C1orf174 protein"
/protein_id="AAH35643.1"
/db_xref="GeneID:339448"
/db_xref="HGNC:HGNC:27915"
/translation="HASAAPPGRVGRGARCLAAVLTLMRSRKLTGAVRSSARLKARSC
SAARLASAQEVAGSTSAKTACLTSSSHKATDRRTSKKFKCDKGHLVKSELQKLVPKND
SASLPKVTPETPCENEFAEGSALLPGSEAGVSVQQGAASLPLGGCRVVSDSRLAKTRD
GLSVPKHSAGSGAEESNSSSTVQKQNEPGLQTEDVQKPPLQMDNSVFLDDDSNQPMPV
SRFFGNVELMQDLPPASSSCPSMSRREFRKMHFRAKDDDDDDDDDAEM"
BASE COUNT 447 a 392 c 393 g 421 t
ORIGIN
1 ccacgcgtcc gccgctccgc cgggacgcgt tggccggggc gcgcggtgct tggctgcggt
61 gctcacactc atgaggagcc ggaagctcac aggtgcagtg cggtcttcag cgcgcttgaa
121 agcacgaagt tgttcggcag ccaggttggc ctctgcccag gaagttgctg gttccacgtc
181 tgccaagaca gcatgtctga cttcctcatc ccacaaagcc acagacaggc gaacgtccaa
241 gaagttcaaa tgtgacaaag gacatcttgt gaagtcagaa ttacagaagc ttgtccctaa
301 gaatgacagc gcttctttgc caaaagtgac acctgagacc ccttgtgaaa atgagtttgc
361 tgaaggcagt gccttgcttc caggcagcga ggctggcgtt tctgtgcagc agggggctgc
421 aagtcttcct cttggtggct gcagagttgt gagtgactct cgcttagcaa agactagaga
481 tggcctgtcc gtgccaaaac acagtgccgg gtccggagca gaagaatcca acagcagctc
541 cactgtgcag aagcagaatg agccagggct acagacagag gatgtgcaga agccaccact
601 tcagatggac aacagcgtct ttctagatga cgacagcaat cagccaatgc ccgtgagccg
661 gttctttgga aacgttgagc tcatgcagga cctcccacct gcgtcttcat cttgtccttc
721 aatgagcaga cgagagttca gaaaaatgca tttcagagcc aaagatgatg atgatgacga
781 cgacgatgat gcagaaatgt aggggccata caaaataatg tccttgagta tttagtacca
841 ttaacaattt gacaatttag cacattacaa gatttatata aaatgtatct ccaagagaat
901 gtcttaatca aacttcagaa ctgacccatc taagtcaata gtgcaaagca cccaatacct
961 gtggaggatg tactcatggg aactaaaact caaaccatct ttgaggttgc aaagctgctg
1021 tactgtgcca atgtcctttc tttttttttt tttttttttt ccttggagac agagtttctc
1081 tcttgtcgcc caggctggag tgcaatggcg caatctcggc tcactgcaac ctccacctcc
1141 tgggttcaag tgattctcct gcctcagcct cctgagtagc tgggattaca ggcatacacc
1201 accacaccca gctagttttt gtattattag tagacacggg ggtttctcca tgttggccag
1261 gctggtctca aactcctgac ctcgtgatac gcccgcctca gcctcccaaa gtgctgggat
1321 tacaggcgcg agccaccatg cccggccagt gtcctttctt atacacgtac atacatgatg
1381 atggcttgag tcagctgcag ggcagtgggc ttaatgagag ggatctttgt aaagacagct
1441 cttcacttca gctcagtagc tttggtcata ggcaagtttg ttttccatta tcataatttg
1501 atgattcttg tgatgaattc aatgctagtt cttaaagaac tcttttattt ctgtatgtgg
1561 agctaatgtt taccttggaa attttgcaaa atacatgtaa gaaagaaata aaatatattt
1621 tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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