LOCUS BC035618 4000 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens somatostatin receptor 1, mRNA (cDNA clone MGC:45280
IMAGE:5175220), complete cds.
ACCESSION BC035618
VERSION BC035618.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4000)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4000)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: j Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33946330.
FEATURES Location/Qualifiers
source 1..4000
/db_xref="H-InvDB:HIT000051442"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45280 IMAGE:5175220"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4000
/gene="SSTR1"
/gene_synonym="SRIF-2"
/db_xref="GeneID:6751"
/db_xref="HGNC:HGNC:11330"
/db_xref="MIM:182451"
CDS 275..1450
/gene="SSTR1"
/gene_synonym="SRIF-2"
/codon_start=1
/product="somatostatin receptor 1"
/protein_id="AAH35618.1"
/db_xref="GeneID:6751"
/db_xref="HGNC:HGNC:11330"
/db_xref="MIM:182451"
/translation="MFPNGTASSPSSSPSPSPGSCGEGGGSRGPGAGAADGMEEPGRN
ASQNGTLSEGQGSAILISFIYSVVCLVGLCGNSMVIYVILRYAKMKTATNIYILNLAI
ADELLMLSVPFLVTSTLLRHWPFGALLCRLVLSVDAVNMFTSIYCLTVLSVDRYVAVV
HPIKAARYRRPTVAKVVNLGVWVLSLLVILPIVVFSRTAANSDGTVACNMLMPEPAQR
WLVGFVLYTFLMGFLLPVGAICLCYVLIIAKMRMVALKAGWQQRKRSERKITLMVMMV
VMVFVICWMPFYVVQLVNVFAEQDDATVSQLSVILGYANSCANPILYGFLSDNFKRSF
QRILCLSWMDNAAEEPVDYYATALKSRAYSVEDFQPENLESGGVFRNGTCTSRITTL"
BASE COUNT 867 a 1077 c 1036 g 1020 t
ORIGIN
1 tgcggtgctc ccacatcctg gcctctcctc tccacagtcg cctgtgcccg ggcaccccgg
61 agctgcaaac tgcagagccc aggcaaccgc tgggctgtgc gccccgccgg cgccggtagg
121 agccgcgctc cccgcagcgg ttgcgctcta cccggaggcg ctgggcggct gcgggctgca
181 ggcaagcggt cgggtgggga gggagggcgc aggcggcggg tgcgcgagga gaaagcccca
241 gccctggcag ccccactggc ccccctcagc tgggatgttc cccaatggca ccgcctcctc
301 tccttcctcc tctcctagcc ccagcccggg cagctgcggc gaaggcggcg gcagcagggg
361 ccccggggcc ggcgctgcgg acggcatgga ggagccaggg cgaaatgcgt cccagaacgg
421 gaccttgagc gagggccagg gcagcgccat cctgatctct ttcatctact ccgtggtgtg
481 cctggtgggg ctgtgtggga actctatggt catctacgtg atcctgcgct atgccaagat
541 gaagacggcc accaacatct acatcctaaa tctggccatt gctgatgagc tgctcatgct
601 cagcgtgccc ttcctagtca cctccacgtt gttgcgccac tggcccttcg gtgcgctgct
661 ctgccgcctc gtgctcagcg tggacgcggt caacatgttc accagcatct actgtctgac
721 tgtgctcagc gtggaccgct acgtggccgt ggtgcatccc atcaaggcgg cccgctaccg
781 ccggcccacc gtggccaagg tagtaaacct gggcgtgtgg gtgctatcgc tgctcgtcat
841 cctgcccatc gtggtcttct ctcgcaccgc ggccaacagc gacggcacgg tggcttgcaa
901 catgctcatg ccagagcccg ctcaacgctg gctggtgggc ttcgtgttgt acacatttct
961 catgggcttc ctgctgcccg tgggggctat ctgcctgtgc tacgtgctca tcattgctaa
1021 gatgcgcatg gtggccctca aggccggctg gcagcagcgc aagcgctcgg agcgcaagat
1081 caccttaatg gtgatgatgg tggtgatggt gtttgtcatc tgctggatgc ctttctacgt
1141 ggtgcagctg gtcaacgtgt ttgctgagca ggacgacgcc acggtgagtc agctgtcggt
1201 catcctcggc tatgccaaca gctgcgccaa ccccatcctc tatggctttc tctcagacaa
1261 cttcaagcgc tctttccaac gcatcctatg cctcagctgg atggacaacg ccgcggagga
1321 gccggttgac tattacgcca ccgcgctcaa gagccgtgcc tacagtgtgg aagacttcca
1381 acctgagaac ctggagtccg gcggcgtctt ccgtaatggc acctgcacgt cccggatcac
1441 gacgctctga gcccgggcca cgcaggggct ctgagcccgg gccacgcagg ggccctgagc
1501 caaaagaggg ggagaatgag aagggaaggc cgggtgcgaa agggacggta tccagggcgc
1561 cagggtgctg tcgggataac gtggggctag gacactgaca gcctttgatg gaggaaccca
1621 agaaaggcgc gcgacaatgg tagaagtgag agctttgctt ataaactggg aaggctttca
1681 ggctaccttt ttctgggtct cccactttct gttccttcct ccactgcgct tactcctctg
1741 accctccttc tattttccct accctgcaac ttctatcctt tcttccgcac cgtcccgcca
1801 gtgcagatca cgaactcatt aacaactcat tctgatcctc agcccctcca gtcgttattt
1861 ctgtttgttt aagctgagcc acggataccg ccacgggttt ccctcggcgt tagtccctag
1921 ccgcgcgggg ccgctgtcca ggttctgtct ggtgccccta ctggagtccc gggaatgacc
1981 gctctccctt tgcgcagccc taccttaagg aaagttggac ttgagaaaga tctaagcagc
2041 tggtcttttc tcctactctt gggtgaaggt gcatctttcc ctgccctccc ctgtccccct
2101 ctcgccgccc gcccgccacc accactctca ctccacccag agtagagcca ggtgcttagt
2161 aaaataggtc ccgcgcttcg aactccaggc tttctggagt tcccacccaa gccctccttt
2221 ggagcaaaga aggagctgag aacaagccga atgaggagtt tttataagat tgcggggtcg
2281 gagtgtgggc gcgtaatagg aatcaccctc ctactgcgcg ttttcaaaga ccaagcgctg
2341 ggcgctcccg ggccgcgcgt ctgcgttagg cagggcaggg tagtgcaggg cacaccttcc
2401 ccggggttcg gggttcgggg ttcggttgca gggctgcagc ccgccttggc tttctccctc
2461 acccaagttt ccggaggagc cgacctaaaa gtaacaatag ataaggtttc ctgctccagt
2521 gtatctcaaa agaccgggcg ccaggggcgg gggacctagg gcgacgtctt cagagtccgc
2581 cagtgttggc ggtgtcgccg caacctgcag gctcccgagt ggggcctgcc tggtctctag
2641 agggttgctg cctttcaagc ggtgcctaag aagttatttt cttgtttaac atatatattt
2701 attaatttat ttgtcgtgtt ggaaaatgtg tctctgcttt ccttttctct gcttgcctag
2761 ccccaggtct tttctttggg accctggggg cgggcatgga agtggaagta ggggcaagct
2821 cttgccccac tccctggcca tctcaacgcc tctcctcaat gctgggccct cttatctcat
2881 cctttcctct agcttttcta tttttgattg tgttgagtga agtttggaga tttttcatac
2941 ttttcttact atagtctctt gtttgtctta ttaggataat acataaatga taatgtgggt
3001 tatcctcctc tccatgcaca gtggaaagtc ctgaactcct ggctttccag gagacatata
3061 taggggaaca tcaccctata tataatttga gtgtatatat atttatatat atgatgtgga
3121 catatgtata cttatcttgc tccattgtca tgagtccatg agtctaagta tagccactga
3181 tggtgacagg tgtgagtctg gctggaacac tttcagtttc aggagtgcaa gcagcactca
3241 aacctggagc tgaggaatct aattcagaca gagactttaa tcactgctga agatgcccct
3301 gctccctctg ggttccagca gaggtgattc ttacatatga tccagttaac atcatcactt
3361 tttttgagga cattgaaagt gaaataattt gtgtctgtgt ttaatattac caactacatt
3421 ggaagcctga gcagggcgag gaccaataat tttaattatt tatatttcct gtattgcttt
3481 agtatgctgg cttgtacata gtaggcacta aatacatgtt tgttggttga ttgtttaagc
3541 cagagtgtat tacaacaatc tggagatact aaatctgggg ttctcaggtt cactcattga
3601 catgatatac aatggttaaa atcactattg aaaaatacgt tttgtgtata tttgcttcaa
3661 caactttgtg ctttcctgaa agcagtaacc aagagttaag atatccctaa tgttttgctt
3721 aaactaatga acaaatatgc tttgggtcat aaatcagaaa gtttagatct gtcccttaat
3781 aaaaatatat attactactc ctttggaaaa tagattttta atggttaaga actgtgaaat
3841 ttacaaatca aaatcttaat cattatcctt ctaagaggat acaaatttag tgctcttaac
3901 ttgttaccat tgtaatatta actaaataaa cagatgtatt atgctgttaa aaaaaaaaaa
3961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//