LOCUS BC035561 1953 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens hexosaminidase (glycosyl hydrolase family 20,
catalytic domain) containing, mRNA (cDNA clone MGC:40554
IMAGE:5211583), complete cds.
ACCESSION BC035561
VERSION BC035561.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1953)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1953)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: k Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734733.
FEATURES Location/Qualifiers
source 1..1953
/db_xref="H-InvDB:HIT000051412"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40554 IMAGE:5211583"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1953
/gene="HEXDC"
/gene_synonym="FLJ23825"
/db_xref="GeneID:284004"
/db_xref="HGNC:HGNC:26307"
CDS 374..1855
/gene="HEXDC"
/gene_synonym="FLJ23825"
/codon_start=1
/product="hexosaminidase (glycosyl hydrolase family 20,
catalytic domain) containing"
/protein_id="AAH35561.1"
/db_xref="GeneID:284004"
/db_xref="HGNC:HGNC:26307"
/translation="MEFVLKHTAFAHLREVGSFPCTLNPHEAESLALVGAMIDQVLEL
HPGAQRLHIGCDEVYYLGEGEASRRWLQQEQNSTGKLCLSHMRAVASGVKARRPSVTP
LVWDDMLRDLPEDQLAASGVPQLVEPVLWDYTADLDVYGKVLLMQKYRRCGFPQLWAA
SAFKGATGPSQAVPPVEHHLRNHVQWLQVAGSGPTDSLQGIILTGWQRYDHYSVLCEL
LPAGVPSLAACLQLLLRGGFDEDVKAKVENLLGISSLEKTDPVRQAPCSPPCPLLPLP
FPRPWRQLFSAGLSAGRGPAPSLAATSLPLSHKSASICAALWMRCWRATGMSLAGSAP
TTASGSSSTRSWFSTSSPQRSASWHSGAPSCRSWRLPCSWLSTRMPWRSGWRKTCTPA
CSGCKLCCRTSARCLPPRCHPPALAGTLLRTPEGRAHARGLLLEAGGALHCQMAWAIR
AHVGVVPSGPAVSCPHSVPEGPGQPLGERLENTEGSSTGRPAL"
BASE COUNT 407 a 599 c 595 g 352 t
ORIGIN
1 cgggcctggc tgcgcccccg gacctcgcgg gaccgcggcg gcgcaggaag aagtccccaa
61 ggagacttcg ccataggagt tcacaggaaa tattgaaatg tcaggttcca cgccatttca
121 gatgagatta gttcatttag accttaaagg agctccacca aaggtctcgt acctctcaga
181 gatttttcct ctgttccgtg cgctaggtgc aaacggcctc ctcattgagt atgaagacat
241 gtttccctac gagggccctc tgaggctgct gagggccaag tacgcctaca gcccctctga
301 aatcaaagag atcttgcatc tggctggact caatgagctg gaggtgattc ccttggtgca
361 gacatttgga cacatggagt ttgtgctgaa gcacacggcc ttcgcccacc tgcgggaggt
421 gggctccttc ccctgcaccc tgaaccccca cgaggcagag tccctggcgc tggtgggcgc
481 catgattgac caggtcctgg agctacaccc aggcgcccag cggctgcaca tcgggtgtga
541 tgaggtctat tacctcggag agggggaggc ctcgcgccgg tggctacagc aagagcagaa
601 cagcacgggg aagttgtgcc tgtcacacat gcgggcggtg gccagcggcg tgaaggcccg
661 gcgccccagc gtgacacccc tggtgtggga cgacatgctc cgagacctgc ctgaggacca
721 gctcgcagcg tccggggtgc cgcagctggt ggagccggtg ctctgggact acacggccga
781 cctggatgtg tacggcaagg tcctcctcat gcagaagtac cggcggtgcg gctttccgca
841 gctgtgggca gccagtgcct tcaagggtgc cacggggccc agccaggccg tgccccctgt
901 tgagcaccac ctcaggaacc acgtgcagtg gctgcaggtg gcgggcagcg ggcccacgga
961 ctcactgcag ggcatcatcc tgaccggctg gcagaggtac gaccactact ctgtgctgtg
1021 cgagctgctg cccgcaggag tcccgtccct ggccgcctgc ctgcagttgc ttctacgcgg
1081 aggatttgat gaagatgtta aagcgaaagt ggagaacctt ctcgggattt ccagcctgga
1141 aaaaacggac cctgttaggc aagcaccctg cagccctccc tgtccccttc ttcccctccc
1201 cttcccccgc ccgtggagac agctgttctc agcagggctc tccgcaggga gggggccggc
1261 tccttccctg gcagcaacat ccttgccctt gtcacacaag tcagcctcca tctgcgcagc
1321 tctgtggatg cgctgctgga gggcaacagg tatgtcactg gctggttcag cccctaccac
1381 cgccagcgga agctcatcca cccggtcatg gttcagcaca tccagcccgc agcgctcagc
1441 ctcctggcac agtggagcac cctcgtgcag gagctggagg ctgccctgca gctggctttc
1501 tacccggatg ccgtggagga gtggctggag gaaaacgtgc accccagcct gcagcggctg
1561 caagctctgc tgcaggacct cagcgaggtg tctgcccccc cgctgccacc caccagccct
1621 ggcagggacg ttgctcagga cccctgaggg gagagctcat gccagggggc tcctgctgga
1681 ggctgggggg gctctgcact gccaaatggc ctgggcaata cgggcccacg tgggcgtcgt
1741 gccctctggc ccagcagtgt cttgcccaca ctcagttcct gagggccctg ggcagcccct
1801 gggggagaga ctagaaaaca cagaaggaag cagcacaggg agacccgctt tgtgatctgc
1861 atgtgtgaca ctgattcttt ggaaataaag agtggaagct gcaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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