LOCUS BC035516 1820 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 71, mRNA (cDNA clone
MGC:34190 IMAGE:5229681), complete cds.
ACCESSION BC035516
VERSION BC035516.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1820)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1820)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: p Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33285012.
FEATURES Location/Qualifiers
source 1..1820
/db_xref="H-InvDB:HIT000051407"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34190 IMAGE:5229681"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1820
/gene="CCDC71"
/gene_synonym="FLJ12800"
/gene_synonym="FLJ13629"
/db_xref="GeneID:64925"
/db_xref="HGNC:HGNC:25760"
CDS 108..1511
/gene="CCDC71"
/gene_synonym="FLJ12800"
/gene_synonym="FLJ13629"
/codon_start=1
/product="coiled-coil domain containing 71"
/protein_id="AAH35516.1"
/db_xref="GeneID:64925"
/db_xref="HGNC:HGNC:25760"
/translation="MSVVVQHVEEKAVHSWSRISTAGKKALEEALLVFNPMSQDLSAT
EAQLVAFLQGLRDDGFQPTILRSGDVYGYSSCTANPPSQTKLQARAPNPTATSPPASA
PRTAMRLPAGRATLLPMPLSGRLAKASTPALAKHATTNLLLSSLKQSSASHARGAAVG
FPTHLYPGVYPAMRLSVVLEALVPLKTPMPCLGAKHKAQSLQLSLADSPLKLRKSSGK
GPGNPRPKAPRKTTSKGPKCLTRKGPGAGPRRGSGHQSKTNRATGSPSVRRMKGGSAL
GTKTAQAKVARTLAKAARAQAKVARTQAKAAKARAKAKAALVKAKAKAKAAQVKAKAK
VMAARAKAKAKAKAVRAKAKVARTQPRGRGRPKGSAKARTTRKGQKNRPETVGQKRKR
AEEAKDLPPKKRTRLGPRSPKAWLGPGTAKLLKFRAIKVDRRSSDDEVRQRAQRILRV
NLSPVIRLQPLLPYSAV"
BASE COUNT 444 a 531 c 522 g 323 t
ORIGIN
1 gttggagcag cggaggcggc gcagaggcgc gtcttgggtc cccgcggcgg cgccggtgcc
61 aagcgctggt ttgcggatac ccaggcagat ctgcagtgcc taatgccatg agtgtggtgg
121 ttcagcatgt ggaggaaaaa gctgtgcact cctggtcgcg catctccacg gcagggaaga
181 aggccctgga agaggcactg cttgtcttta acccaatgag ccaggatctc agtgccacag
241 aggcccagct tgtggccttc ctgcagggcc tgcgagatga tggcttccaa cctaccatcc
301 tgcgcagtgg tgatgtctat ggctatagtt catgcacagc taatccccca agccagacga
361 aactgcaagc tcgtgcccct aacccaactg ccacatcacc tccagccagt gctccccgaa
421 ctgccatgcg gttgcctgca ggtcgggcca cactgcttcc catgccgcta tctggcagac
481 tggccaaagc atccacacca gcccttgcca agcatgctac caccaacctg ctgctgagct
541 ctctgaagca atcaagtgcc agccatgccc ggggtgcagc agtgggcttc cccacccacc
601 tttatccagg tgtctaccct gccatgcggc tctctgttgt ccttgaggcc ctggttccac
661 ttaagactcc catgccctgc ttgggtgcca agcacaaggc acagtcactg cagctctcac
721 ttgcagactc tcctctgaaa ctgcggaaaa gttcagggaa gggtccgggg aaccctcggc
781 ccaaagctcc cagaaaaacc acaagcaagg gccccaagtg tctgactcgc aaaggccctg
841 gggctggacc ccgacgaggc tctgggcacc agagcaaaac caacagagcc actgggtccc
901 ccagtgtccg gcgaatgaaa gggggctctg ccctgggcac caaaacagcc caggccaagg
961 tagctcgaac actggccaaa gctgctcgtg cccaagccaa ggtggctcga acacaggcca
1021 aggctgctaa ggcccgggcc aaggccaagg cagcactggt caaggctaag gccaaagcta
1081 aggcagcaca ggtcaaggcc aaggccaaag tcatggcagc acgggccaag gccaaggcta
1141 aagccaaggc agtacgggcc aaggccaagg tggctcggac ccagcccagg ggcagaggca
1201 ggccaaaggg atctgctaag gccagaacta caaggaaggg ccagaaaaac cgccctgaga
1261 ctgttgggca gaagaggaaa agggctgagg aggcaaaaga tcttcctccc aagaagagaa
1321 cacggcttgg gccccgatct cctaaggcat ggctagggcc tggaacagca aagctgctga
1381 agttccgtgc cataaaggta gataggcggt cctcggatga tgaggtgcgg cagcgggctc
1441 agcggatcct ccgcgtgaac ctgtcacctg taatacggct ccagccattg ctgccatatt
1501 cagcagtctg attccttcac acggcaatgt ttggggaaac taagcccagc tgtctgtgtg
1561 gctagtggca cagtgtgcta tgtccgtgga ctccacaatc ttgaggactc ccggtgcctc
1621 tctagggccc tggtgaccac cagcctcctt tcagaaacca gagtgggtgg ggtacggtgg
1681 ggtgggtggg cgggaggggt gttttcatgg cgcgatgcac tgtgacttgt tattcaagtt
1741 gtatgtctac tgttccatct atcacgtttt atacctttcc aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa
//